WormBase Tree Display for Variation: WBVar02101193
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WBVar02101193 | Name | Public_name | WBVar02101193 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00831436 | |||||||
F40G9.5.1:c.-680_-656delinsTGGAAACAAACCCTTAAAACTTCTC | ||||||||
F40G9.15.1:c.237+3_238-19delinsTGGAAACAAACCCTTAAAACTTCTC | ||||||||
HGVSg | CHROMOSOME_III:g.182665_182689delinsTGGAAACAAACCCTTAAAACTTCTC | |||||||
Sequence_details | SMap | S_parent | Sequence | F40G9 | ||||
Flanking_sequences | CCAAGATACAAATGACGGACCCTTTGATGT | ATAAACTCCATATTTCAGAAAGAATTCGAG | ||||||
Mapping_target | F40G9 | |||||||
Source_location | 225 | CHROMOSOME_III | 182664 | 182688 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Insertion | TGGAAACAAACCCTTAAAACTTCTC | ||||||
Deletion | ||||||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00008273 | From_analysis | Million_mutation_project_reanalysis | |||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00018241 | ||||||
WBGene00077531 | ||||||||
Transcript | F40G9.15.1 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | F40G9.15.1:c.237+3_238-19delinsTGGAAACAAACCCTTAAAACTTCTC | |||||||
Intron_number | 2/4 | |||||||
F40G9.5.1 | VEP_consequence | 5_prime_UTR_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | F40G9.5.1:c.-680_-656delinsTGGAAACAAACCCTTAAAACTTCTC | |||||||
cDNA_position | 1402-1427 | |||||||
Exon_number | 1/7 | |||||||
Method | WGS_Flibotte |