WormBase Tree Display for Variation: WBVar02101113
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WBVar02101113 | Name | Public_name | WBVar02101113 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00831355 | |||||||
C29F9.6.3:c.135+36_135+54delinsTATTTGTCATTAGAGATAG | ||||||||
C29F9.6.1:c.135+36_135+54delinsTATTTGTCATTAGAGATAG | ||||||||
C29F9.6.2:c.135+36_135+54delinsTATTTGTCATTAGAGATAG | ||||||||
HGVSg | CHROMOSOME_III:g.115423_115441delinsTATTTGTCATTAGAGATAG | |||||||
Sequence_details | SMap | S_parent | Sequence | C29F9 | ||||
Flanking_sequences | TTACTGGAAAGACTCACTGGGGAACTTAGT | GTGATAGGCTGAGCTGAAAACCTAGAAGTT | ||||||
Mapping_target | C29F9 | |||||||
Source_location | 225 | CHROMOSOME_III | 115422 | 115440 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Insertion | TATTTGTCATTAGAGATAG | ||||||
Deletion | ||||||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00008273 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00023138 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00031113 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00016221 | ||||||
WBGene00219840 | ||||||||
Transcript | C29F9.6.1 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | C29F9.6.1:c.135+36_135+54delinsTATTTGTCATTAGAGATAG | |||||||
Intron_number | 5/8 | |||||||
C29F9.6.3 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | C29F9.6.3:c.135+36_135+54delinsTATTTGTCATTAGAGATAG | |||||||
Intron_number | 4/7 | |||||||
C29F9.15 | VEP_consequence | non_coding_transcript_exon_variant | ||||||
VEP_impact | MODIFIER | |||||||
cDNA_position | ?-13 | |||||||
Exon_number | 1/1 | |||||||
C29F9.6.2 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | C29F9.6.2:c.135+36_135+54delinsTATTTGTCATTAGAGATAG | |||||||
Intron_number | 3/6 | |||||||
Method | WGS_Flibotte |