WormBase Tree Display for Variation: WBVar02101112
expand all nodes | collapse all nodes | view schema
WBVar02101112 | Name | Public_name | WBVar02101112 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00831354 | |||||||
C29F9.6.2:c.25+7_26-4delinsTTTTTAACTACACCTACCTAATAAATTTTCTAATAATTTC | ||||||||
C29F9.6.1:c.25+7_26-4delinsTTTTTAACTACACCTACCTAATAAATTTTCTAATAATTTC | ||||||||
C29F9.6.3:c.25+7_26-4delinsTTTTTAACTACACCTACCTAATAAATTTTCTAATAATTTC | ||||||||
HGVSg | CHROMOSOME_III:g.115239_115274delinsTTTTTAACTACACCTACCTAATAAATTTTCTAATAATTTC | |||||||
Sequence_details | SMap | S_parent | Sequence | C29F9 | ||||
Flanking_sequences | TGACTATTCCCAAGAACCCGCAAAGTTTGT | CAGCCTTACACCTCTCCAACATTCGCATCG | ||||||
Mapping_target | C29F9 | |||||||
Source_location | 225 | CHROMOSOME_III | 115238 | 115273 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Insertion | TTTTTAACTACACCTACCTAATAAATTTTCTAATAATTTC | ||||||
Deletion | ||||||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00008273 | From_analysis | Million_mutation_project_reanalysis | |||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00016221 | ||||||
Transcript | C29F9.6.1 | VEP_consequence | splice_acceptor_variant,intron_variant | |||||
VEP_impact | HIGH | |||||||
HGVSc | C29F9.6.1:c.25+7_26-4delinsTTTTTAACTACACCTACCTAATAAATTTTCTAATAATTTC | |||||||
Intron_number | 4/8 | |||||||
C29F9.6.3 | VEP_consequence | splice_acceptor_variant,intron_variant | ||||||
VEP_impact | HIGH | |||||||
HGVSc | C29F9.6.3:c.25+7_26-4delinsTTTTTAACTACACCTACCTAATAAATTTTCTAATAATTTC | |||||||
Intron_number | 3/7 | |||||||
C29F9.6.2 | VEP_consequence | splice_acceptor_variant,intron_variant | ||||||
VEP_impact | HIGH | |||||||
HGVSc | C29F9.6.2:c.25+7_26-4delinsTTTTTAACTACACCTACCTAATAAATTTTCTAATAATTTC | |||||||
Intron_number | 2/6 | |||||||
Method | WGS_Flibotte |