WormBase Tree Display for Variation: WBVar02093958
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WBVar02093958 | Name | Public_name | WBVar02093958 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00823936 | |||||||
ZK1127.12.1:c.140_156delinsTA | ||||||||
ZK1127.12.2:c.140_156delinsTA | ||||||||
CE33491:p.Pro47_Ser52delinsLeu | ||||||||
HGVSg | CHROMOSOME_II:g.7052566_7052582delinsTA | |||||||
Sequence_details | SMap | S_parent | Sequence | ZK1127 | ||||
Flanking_sequences | TTCTTCAGGTCGAGGAGATGCATTCAAAAC | GTCCGATCTACGGTAACAGATCGTGATGAC | ||||||
Mapping_target | ZK1127 | |||||||
Source_location | 225 | CHROMOSOME_II | 7052524 | 7052540 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Insertion | TA | ||||||
Deletion | ||||||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00006625 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00006640 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022886 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022930 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00023191 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00022857 | ||||||
Transcript | ZK1127.12.1 | VEP_consequence | protein_altering_variant | |||||
VEP_impact | MODERATE | |||||||
HGVSc | ZK1127.12.1:c.140_156delinsTA | |||||||
HGVSp | CE33491:p.Pro47_Ser52delinsLeu | |||||||
cDNA_position | 222-238 | |||||||
CDS_position | 140-156 | |||||||
Protein_position | 47-52 | |||||||
Exon_number | 4/5 | |||||||
Codon_change | cCGATCTACGGTAACAGT/cTA | |||||||
Amino_acid_change | PIYGNS/L | |||||||
ZK1127.12.2 | VEP_consequence | protein_altering_variant | ||||||
VEP_impact | MODERATE | |||||||
HGVSc | ZK1127.12.2:c.140_156delinsTA | |||||||
HGVSp | CE33491:p.Pro47_Ser52delinsLeu | |||||||
cDNA_position | 147-163 | |||||||
CDS_position | 140-156 | |||||||
Protein_position | 47-52 | |||||||
Exon_number | 3/4 | |||||||
Codon_change | cCGATCTACGGTAACAGT/cTA | |||||||
Amino_acid_change | PIYGNS/L | |||||||
Method | WGS_Flibotte |