WormBase Tree Display for Variation: WBVar02093608
expand all nodes | collapse all nodes | view schema
WBVar02093608 | Name | Public_name | WBVar02093608 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00823582 | |||||||
T07D3.7b.1:c.1506_1515delinsCCAACTTCAG | ||||||||
CE13367:p.ThrGlnLeuGln502= | ||||||||
CE32063:p.ThrGlnLeuGln521= | ||||||||
T07D3.7a.1:c.1563_1572delinsCCAACTTCAG | ||||||||
HGVSg | CHROMOSOME_II:g.876624_876633delinsCCAACTTCAG | |||||||
Sequence_details | SMap | S_parent | Sequence | T07D3 | ||||
Flanking_sequences | CAAGGAAAATGATCTCAGGATGTTCACGAC | AGGATCTCTACCGACGCTGGAATGCCAATC | ||||||
Mapping_target | T07D3 | |||||||
Source_location | 225 | CHROMOSOME_II | 876631 | 876640 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Insertion | CCAACTTCAG | ||||||
Deletion | ||||||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00006625 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00023665 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027652 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00000106 | ||||||
Transcript | T07D3.7b.1 | VEP_consequence | synonymous_variant | |||||
VEP_impact | LOW | |||||||
HGVSc | T07D3.7b.1:c.1506_1515delinsCCAACTTCAG | |||||||
HGVSp | CE13367:p.ThrGlnLeuGln502= | |||||||
cDNA_position | 1507-1517 | |||||||
CDS_position | 1505-1515 | |||||||
Protein_position | 502-505 | |||||||
Exon_number | 5/8 | |||||||
Codon_change | aCTCAATTGCAA/aCCCAACTTCAG | |||||||
Amino_acid_change | TQLQ | |||||||
T07D3.7a.1 | VEP_consequence | synonymous_variant | ||||||
VEP_impact | LOW | |||||||
HGVSc | T07D3.7a.1:c.1563_1572delinsCCAACTTCAG | |||||||
HGVSp | CE32063:p.ThrGlnLeuGln521= | |||||||
cDNA_position | 1562-1572 | |||||||
CDS_position | 1562-1572 | |||||||
Protein_position | 521-524 | |||||||
Exon_number | 5/8 | |||||||
Codon_change | aCTCAATTGCAA/aCCCAACTTCAG | |||||||
Amino_acid_change | TQLQ | |||||||
Method | WGS_Flibotte |