WormBase Tree Display for Variation: WBVar02090906
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WBVar02090906 | Name | Public_name | WBVar02090906 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00820791 | |||||||
C54D10.8a.1:c.963_968delinsTTTGTC | ||||||||
CE45432:p.Leu323Ser | ||||||||
C54D10.8b.1:c.852_857delinsTTTGTC | ||||||||
CE47766:p.Leu286Ser | ||||||||
HGVSg | CHROMOSOME_V:g.12445603_12445608delinsGACAAA | |||||||
Sequence_details | SMap | S_parent | Sequence | C54D10 | ||||
Flanking_sequences | TCCATAATACTTTTCTGATTAACAACTGCT | AGATGCTTTGCGTGAGTTTCATGATAGTTT | ||||||
Mapping_target | C54D10 | |||||||
Source_location | 225 | CHROMOSOME_V | 12445584 | 12445589 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Insertion | GACAAA | ||||||
Deletion | ||||||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | |||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00008302 | ||||||
Transcript | C54D10.8a.1 | VEP_consequence | missense_variant | |||||
VEP_impact | MODERATE | |||||||
HGVSc | C54D10.8a.1:c.963_968delinsTTTGTC | |||||||
HGVSp | CE45432:p.Leu323Ser | |||||||
cDNA_position | 1002-1008 | |||||||
CDS_position | 963-969 | |||||||
Protein_position | 321-323 | |||||||
Exon_number | 6/8 | |||||||
Codon_change | ctACTGTTA/ctTTTGTCA | |||||||
Amino_acid_change | LLL/LLS | |||||||
C54D10.8b.1 | VEP_consequence | missense_variant | ||||||
VEP_impact | MODERATE | |||||||
HGVSc | C54D10.8b.1:c.852_857delinsTTTGTC | |||||||
HGVSp | CE47766:p.Leu286Ser | |||||||
cDNA_position | 852-858 | |||||||
CDS_position | 852-858 | |||||||
Protein_position | 284-286 | |||||||
Exon_number | 5/6 | |||||||
Codon_change | ctACTGTTA/ctTTTGTCA | |||||||
Amino_acid_change | LLL/LLS | |||||||
Method | WGS_Flibotte |