WormBase Tree Display for Variation: WBVar02089656
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WBVar02089656 | Name | Public_name | WBVar02089656 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00819516 | |||||||
E03A3.6a.1:c.3623-290delinsTGGCGTGCCTAGGAGGCA | ||||||||
E03A3.6b.2:c.-44-290delinsTGGCGTGCCTAGGAGGCA | ||||||||
E03A3.6b.1:c.-44-290delinsTGGCGTGCCTAGGAGGCA | ||||||||
HGVSg | CHROMOSOME_III:g.4078364delinsTGGCGTGCCTAGGAGGCA | |||||||
Sequence_details | SMap | S_parent | Sequence | E03A3 | ||||
Flanking_sequences | CTAGAATTTCCATACGGGCGAAAAAATGCC | GGCGTAGCTTGCCTTGAAATCGAAAAGAAA | ||||||
Mapping_target | E03A3 | |||||||
Source_location | 225 | CHROMOSOME_III | 4078339 | 4078339 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Insertion | TGGCGTGCCTAGGAGGCA | ||||||
Deletion | ||||||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00006631 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00006640 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00006643 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00006645 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00008273 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00023138 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027647 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00006811 | ||||||
Transcript | E03A3.6a.1 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | E03A3.6a.1:c.3623-290delinsTGGCGTGCCTAGGAGGCA | |||||||
Intron_number | 15/27 | |||||||
E03A3.6b.2 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | E03A3.6b.2:c.-44-290delinsTGGCGTGCCTAGGAGGCA | |||||||
Intron_number | 1/14 | |||||||
E03A3.6b.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | E03A3.6b.1:c.-44-290delinsTGGCGTGCCTAGGAGGCA | |||||||
Intron_number | 13/26 | |||||||
Method | WGS_Flibotte |