WormBase Tree Display for Variation: WBVar02088283
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WBVar02088283 | Name | Public_name | WBVar02088283 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00818097 | |||||||
T04A11.12b.1:c.240+181_240+197delinsAGGAA | ||||||||
T04A11.12a.1:c.240+181_240+197delinsAGGAA | ||||||||
HGVSg | CHROMOSOME_IV:g.12487999_12488015delinsAGGAA | |||||||
Sequence_details | SMap | S_parent | Sequence | T04A11 | ||||
Flanking_sequences | TCAAATTTTCTCAGAGAACACAAATTTGAT | ATTCAATTTAGTTCTTCTTATTCTCAAAAT | ||||||
Mapping_target | T04A11 | |||||||
Source_location | 225 | CHROMOSOME_IV | 12487976 | 12487992 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Insertion | AGGAA | ||||||
Deletion | ||||||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00004600 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00005689 | ||||||
Transcript | T04A11.12a.1 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | T04A11.12a.1:c.240+181_240+197delinsAGGAA | |||||||
Intron_number | 2/5 | |||||||
T04A11.12b.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | T04A11.12b.1:c.240+181_240+197delinsAGGAA | |||||||
Intron_number | 1/4 | |||||||
Method | WGS_Flibotte |