WormBase Tree Display for Variation: WBVar02085334
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WBVar02085334 | Name | Public_name | WBVar02085334 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00815037 | |||||||
Y55D5A.5d.1:c.5305-91_5305-38delinsTGAAAAAAAGAGCCCGAAAATG | ||||||||
Y55D5A.5c.1:c.5692-91_5692-38delinsTGAAAAAAAGAGCCCGAAAATG | ||||||||
Y55D5A.5f.1:c.3016-91_3016-38delinsTGAAAAAAAGAGCCCGAAAATG | ||||||||
Y55D5A.5a.1:c.5446-91_5446-38delinsTGAAAAAAAGAGCCCGAAAATG | ||||||||
Y55D5A.5g.1:c.1924-91_1924-38delinsTGAAAAAAAGAGCCCGAAAATG | ||||||||
Y55D5A.5e.1:c.5218-91_5218-38delinsTGAAAAAAAGAGCCCGAAAATG | ||||||||
HGVSg | CHROMOSOME_III:g.2996052_2996105delinsCATTTTCGGGCTCTTTTTTTCA | |||||||
Sequence_details | SMap | S_parent | Sequence | Y55D5A | ||||
Flanking_sequences | ATTAATAAAAATTAATATTTGTGTTTGAAA | AATATTAGAATTTTTGAGCGGAAAAATTAA | ||||||
Mapping_target | Y55D5A | |||||||
Source_location | 225 | CHROMOSOME_III | 2996044 | 2996097 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Insertion | CATTTTCGGGCTCTTTTTTTCA | ||||||
Deletion | ||||||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain (20) | ||||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00000898 | ||||||
Transcript | Y55D5A.5g.1 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y55D5A.5g.1:c.1924-91_1924-38delinsTGAAAAAAAGAGCCCGAAAATG | |||||||
Intron_number | 3/3 | |||||||
Y55D5A.5e.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y55D5A.5e.1:c.5218-91_5218-38delinsTGAAAAAAAGAGCCCGAAAATG | |||||||
Intron_number | 14/14 | |||||||
Y55D5A.5f.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y55D5A.5f.1:c.3016-91_3016-38delinsTGAAAAAAAGAGCCCGAAAATG | |||||||
Intron_number | 7/7 | |||||||
Y55D5A.5a.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y55D5A.5a.1:c.5446-91_5446-38delinsTGAAAAAAAGAGCCCGAAAATG | |||||||
Intron_number | 17/18 | |||||||
Y55D5A.5c.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y55D5A.5c.1:c.5692-91_5692-38delinsTGAAAAAAAGAGCCCGAAAATG | |||||||
Intron_number | 19/20 | |||||||
Y55D5A.5d.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y55D5A.5d.1:c.5305-91_5305-38delinsTGAAAAAAAGAGCCCGAAAATG | |||||||
Intron_number | 15/15 | |||||||
Method | WGS_Flibotte |