WormBase Tree Display for Variation: WBVar02083326
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WBVar02083326 | Name | Public_name | WBVar02083326 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00812977 | |||||||
CE38114:p.Arg270AlafsTer6 | ||||||||
Y113G7B.9.1:c.808_834delinsGCTTTACAGAATATCTGAA | ||||||||
HGVSg | CHROMOSOME_V:g.20207827_20207853delinsGCTTTACAGAATATCTGAA | |||||||
Sequence_details | SMap | S_parent | Sequence | Y113G7B | ||||
Flanking_sequences | GGATGCGCAATTGAGTCGACTGTTGTAACT | AACTCTGCCAGTACTCCAGTGTTTGCGAAA | ||||||
Mapping_target | Y113G7B | |||||||
Source_location | 225 | CHROMOSOME_V | 20207796 | 20207822 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Insertion | GCTTTACAGAATATCTGAA | ||||||
Deletion | ||||||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00000032 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00022868 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00013760 | ||||||
Transcript | Y113G7B.9.1 | VEP_consequence | stop_gained,frameshift_variant | |||||
VEP_impact | HIGH | |||||||
HGVSc | Y113G7B.9.1:c.808_834delinsGCTTTACAGAATATCTGAA | |||||||
HGVSp | CE38114:p.Arg270AlafsTer6 | |||||||
cDNA_position | 1160-1186 | |||||||
CDS_position | 808-834 | |||||||
Protein_position | 270-278 | |||||||
Exon_number | 7/7 | |||||||
Codon_change | AGGGTTCTGCTTTTCAGAACACCTGAG/GCTTTACAGAATATCTGAA | |||||||
Amino_acid_change | RVLLFRTPE/ALQNI*X | |||||||
Method | WGS_Flibotte |