WormBase Tree Display for Variation: WBVar02080564
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WBVar02080564 | Name | Public_name | WBVar02080564 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00810140 | |||||||
Y26D4A.8.1:c.1018_1033delinsGCAGTCCCTCAAGATA | ||||||||
CE21488:p.Ser340_His345delinsAlaValProGlnAspAsn | ||||||||
HGVSg | CHROMOSOME_I:g.13083431_13083446delinsTATCTTGAGGGACTGC | |||||||
Sequence_details | SMap | S_parent | Sequence | Y26D4A | ||||
Flanking_sequences | CTTTTCTTTCTTCTTTGTTTTCTTCCGAAT | TTCTGCCGCCTCAAGACTTAATAGTTCACT | ||||||
Mapping_target | Y26D4A | |||||||
Source_location | 225 | CHROMOSOME_I | 13083419 | 13083434 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Insertion | TATCTTGAGGGACTGC | ||||||
Deletion | ||||||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00000032 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00004600 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022868 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022902 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00012505 | ||||||
Transcript | Y26D4A.8.1 | VEP_consequence | missense_variant | |||||
VEP_impact | MODERATE | |||||||
HGVSc | Y26D4A.8.1:c.1018_1033delinsGCAGTCCCTCAAGATA | |||||||
HGVSp | CE21488:p.Ser340_His345delinsAlaValProGlnAspAsn | |||||||
cDNA_position | 1489-1505 | |||||||
CDS_position | 1018-1034 | |||||||
Protein_position | 340-345 | |||||||
Exon_number | 5/5 | |||||||
Codon_change | TCGATACCTCAAGAGCAt/GCAGTCCCTCAAGATAAt | |||||||
Amino_acid_change | SIPQEH/AVPQDN | |||||||
Method | WGS_Flibotte |