WormBase Tree Display for Variation: WBVar02077797
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WBVar02077797 | Name | Public_name | WBVar02077797 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00807110 | |||||||
F42A9.6c.2:c.248-702_248-582del | ||||||||
F42A9.6b.1:c.458-702_458-582del | ||||||||
F42A9.6a.1:c.313+225_313+345del | ||||||||
F42A9.6c.1:c.248-702_248-582del | ||||||||
F42A9.6a.3:c.313+225_313+345del | ||||||||
F42A9.6a.2:c.313+225_313+345del | ||||||||
HGVSg | CHROMOSOME_IV:g.8610674_8610794del | |||||||
Sequence_details | SMap | S_parent | Sequence | F42A9 | ||||
Flanking_sequences | TTTATGCAAATAATTTTGTGTTCAAAGAAA | ACAACTTTCCAGGTTTGAAAATGAGTTCCA | ||||||
Mapping_target | F42A9 | |||||||
Source_location | 225 | CHROMOSOME_IV | 8610661 | 8610781 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Deletion | |||||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027662 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00018335 | ||||||
Transcript | F42A9.6c.1 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | F42A9.6c.1:c.248-702_248-582del | |||||||
Intron_number | 5/6 | |||||||
F42A9.6a.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | F42A9.6a.1:c.313+225_313+345del | |||||||
Intron_number | 6/7 | |||||||
F42A9.6b.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | F42A9.6b.1:c.458-702_458-582del | |||||||
Intron_number | 5/6 | |||||||
F42A9.6c.2 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | F42A9.6c.2:c.248-702_248-582del | |||||||
Intron_number | 4/5 | |||||||
F42A9.6a.2 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | F42A9.6a.2:c.313+225_313+345del | |||||||
Intron_number | 6/7 | |||||||
F42A9.6a.3 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | F42A9.6a.3:c.313+225_313+345del | |||||||
Intron_number | 5/6 | |||||||
Method | WGS_Flibotte |