WormBase Tree Display for Variation: WBVar02077437

WBVar02077437 Name: Public_name: WBVar02077437
    Other_name: cewivar00806750
      F53F10.2c.2:c.*13_*296del
      F53F10.2a.1:c.-297_-14del
      F53F10.2c.1:c.*13_*296del
      F53F10.2a.5:c.-297_-14del
      F53F10.2a.3:c.-297_-14del
      F53F10.2a.2:c.-356_-73del
      F53F10.2a.4:c.-297_-14del
    HGVSg: CHROMOSOME_I:g.3831890_3832173del
  Sequence_details: SMap: S_parent: Sequence: F53F10
    Flanking_sequences: TCCCGTTCTGCCGACTGACCGACTCTCTCT TATAAAATGTGAGTTTAATTAATTATTTTT
    Mapping_target: F53F10
    Source_location: 225 CHROMOSOME_I 3831893 3832176 From_analysis: Million_mutation_project_reanalysis
    Type_of_mutation: Deletion
    SeqStatus: Sequenced
  Variation_type: Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00008273 From_analysis: Million_mutation_project_reanalysis
    Laboratory: VC
    Analysis: Million_mutation_project_reanalysis
    Status: Live
  Affects: Gene: WBGene00018764
    Transcript: F53F10.2c.1 VEP_consequence: 3_prime_UTR_variant
        VEP_impact: MODIFIER
        HGVSc: F53F10.2c.1:c.*13_*296del
        cDNA_position: 356-639
        Exon_number: 5/7
      F53F10.2a.1 VEP_consequence: 5_prime_UTR_variant
        VEP_impact: MODIFIER
        HGVSc: F53F10.2a.1:c.-297_-14del
        cDNA_position: 911-1194
        Exon_number: 3/8
      F53F10.2a.2 VEP_consequence: 5_prime_UTR_variant
        VEP_impact: MODIFIER
        HGVSc: F53F10.2a.2:c.-356_-73del
        cDNA_position: 1958-2241
        Exon_number: 3/7
      F53F10.2c.2 VEP_consequence: 3_prime_UTR_variant
        VEP_impact: MODIFIER
        HGVSc: F53F10.2c.2:c.*13_*296del
        cDNA_position: 370-653
        Exon_number: 5/6
      F53F10.2f.1 VEP_consequence: transcript_ablation
        VEP_impact: HIGH
        Exon_number: 1/1
      F53F10.2a.3 VEP_consequence: 5_prime_UTR_variant
        VEP_impact: MODIFIER
        HGVSc: F53F10.2a.3:c.-297_-14del
        cDNA_position: 723-1006
        Exon_number: 2/7
      F53F10.2a.5 VEP_consequence: 5_prime_UTR_variant
        VEP_impact: MODIFIER
        HGVSc: F53F10.2a.5:c.-297_-14del
        cDNA_position: 169-452
        Exon_number: 2/7
      F53F10.2a.4 VEP_consequence: 5_prime_UTR_variant
        VEP_impact: MODIFIER
        HGVSc: F53F10.2a.4:c.-297_-14del
        cDNA_position: 358-641
        Exon_number: 3/8
  Method: WGS_Flibotte