WormBase Tree Display for Variation: WBVar02077247
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| WBVar02077247 | Name | Public_name | WBVar02077247 | |||||
|---|---|---|---|---|---|---|---|---|
| Other_name | cewivar00806560 | |||||||
| Y55D5A.5d.1:c.2234+27_2234+178delinsAATTGCCGATTCC | ||||||||
| Y55D5A.5a.1:c.2375+27_2375+178delinsAATTGCCGATTCC | ||||||||
| Y55D5A.5e.1:c.2147+27_2147+178delinsAATTGCCGATTCC | ||||||||
| Y55D5A.5c.1:c.2375+27_2375+178delinsAATTGCCGATTCC | ||||||||
| HGVSg | CHROMOSOME_III:g.3012008_3012159delinsGGAATCGGCAATT | |||||||
| Sequence_details | SMap | S_parent | Sequence | Y55D5A | ||||
| Flanking_sequences | CTGAAAATCAAAATTTCCGGCAAATCGGTAATTTGCTGAAAATCAAAATTTCCGACAAATCGACAAAGTGACGAAAATCAAAATTTCCGG | TGACGAAAATCAAAAACTAGACCCACTGAA | ||||||
| Mapping_target | Y55D5A | |||||||
| Source_location | 225 | CHROMOSOME_III | 3012000 | 3012151 | From_analysis | Million_mutation_project_reanalysis | ||
| Type_of_mutation | Insertion | GGAATCGGCAATT | ||||||
| Deletion | ||||||||
| SeqStatus | Sequenced | |||||||
| Variation_type | Natural_variant | |||||||
| Origin | Species | Caenorhabditis elegans | ||||||
| Strain | WBStrain00006640 | From_analysis | Million_mutation_project_reanalysis | |||||
| WBStrain00008273 | From_analysis | Million_mutation_project_reanalysis | ||||||
| WBStrain00022878 | From_analysis | Million_mutation_project_reanalysis | ||||||
| WBStrain00022887 | From_analysis | Million_mutation_project_reanalysis | ||||||
| WBStrain00023665 | From_analysis | Million_mutation_project_reanalysis | ||||||
| WBStrain00027647 | From_analysis | Million_mutation_project_reanalysis | ||||||
| Laboratory | VC | |||||||
| Analysis | Million_mutation_project_reanalysis | |||||||
| Status | Live | |||||||
| Affects | Gene | WBGene00000898 | ||||||
| Transcript | Y55D5A.5e.1 | VEP_consequence | intron_variant | |||||
| VEP_impact | MODIFIER | |||||||
| HGVSc | Y55D5A.5e.1:c.2147+27_2147+178delinsAATTGCCGATTCC | |||||||
| Intron_number | 7/14 | |||||||
| Y55D5A.5a.1 | VEP_consequence | intron_variant | ||||||
| VEP_impact | MODIFIER | |||||||
| HGVSc | Y55D5A.5a.1:c.2375+27_2375+178delinsAATTGCCGATTCC | |||||||
| Intron_number | 10/18 | |||||||
| Y55D5A.5c.1 | VEP_consequence | intron_variant | ||||||
| VEP_impact | MODIFIER | |||||||
| HGVSc | Y55D5A.5c.1:c.2375+27_2375+178delinsAATTGCCGATTCC | |||||||
| Intron_number | 11/20 | |||||||
| Y55D5A.5d.1 | VEP_consequence | intron_variant | ||||||
| VEP_impact | MODIFIER | |||||||
| HGVSc | Y55D5A.5d.1:c.2234+27_2234+178delinsAATTGCCGATTCC | |||||||
| Intron_number | 8/15 | |||||||
| Method | WGS_Flibotte |
