WormBase Tree Display for Variation: WBVar02069220
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WBVar02069220 | Name | Public_name | WBVar02069220 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00798487 | |||||||
Y18D10A.25.1:c.660_665del | ||||||||
Y18D10A.25.2:c.660_665del | ||||||||
CE21415:p.Cys221_His222del | ||||||||
HGVSg | CHROMOSOME_I:g.12917710_12917715del | |||||||
Sequence_details | SMap | S_parent | Sequence | Y18D10A | ||||
Flanking_sequences | CACCAAGTCAAAGAACGGTCAGACCGTCAC | CTACGTGCTCATCCTTGTGGACGGAACGAA | ||||||
Mapping_target | Y18D10A | |||||||
Source_location | 225 | CHROMOSOME_I | 12917699 | 12917704 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Deletion | |||||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00027647 | From_analysis | Million_mutation_project_reanalysis | |||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00001433 | ||||||
Transcript | Y18D10A.25.2 | VEP_consequence | inframe_deletion | |||||
VEP_impact | MODERATE | |||||||
HGVSc | Y18D10A.25.2:c.660_665del | |||||||
HGVSp | CE21415:p.Cys221_His222del | |||||||
cDNA_position | 849-854 | |||||||
CDS_position | 660-665 | |||||||
Protein_position | 220-222 | |||||||
Exon_number | 6/8 | |||||||
Codon_change | acCTGCCAc/acc | |||||||
Amino_acid_change | TCH/T | |||||||
Y18D10A.25.1 | VEP_consequence | inframe_deletion | ||||||
VEP_impact | MODERATE | |||||||
HGVSc | Y18D10A.25.1:c.660_665del | |||||||
HGVSp | CE21415:p.Cys221_His222del | |||||||
cDNA_position | 734-739 | |||||||
CDS_position | 660-665 | |||||||
Protein_position | 220-222 | |||||||
Exon_number | 5/7 | |||||||
Codon_change | acCTGCCAc/acc | |||||||
Amino_acid_change | TCH/T | |||||||
Method | WGS_Flibotte |