WormBase Tree Display for Variation: WBVar02060447
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WBVar02060447 | Name | Public_name | WBVar02060447 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00789684 | |||||||
K09G1.1e.1:c.328-9_328-5del | ||||||||
K09G1.1a.1:c.223-9_223-5del | ||||||||
K09G1.1c.1:c.301-9_301-5del | ||||||||
K09G1.1b.2:c.187-9_187-5del | ||||||||
K09G1.1b.1:c.187-9_187-5del | ||||||||
K09G1.1b.3:c.187-9_187-5del | ||||||||
K09G1.1d.1:c.310-9_310-5del | ||||||||
K09G1.1b.4:c.187-9_187-5del | ||||||||
HGVSg | CHROMOSOME_V:g.9589695_9589699del | |||||||
Sequence_details | SMap | S_parent | Sequence | K09G1 | ||||
Flanking_sequences | TTTTTTGCTTGCAAATCATAAAACCTGAAT | ACAGGTTCTTTCTTTCATCGCCTTCATCCT | ||||||
Mapping_target | K09G1 | |||||||
Source_location | 225 | CHROMOSOME_V | 9589671 | 9589675 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Deletion | |||||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | |||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00010727 | ||||||
Transcript | K09G1.1b.2 | VEP_consequence | splice_region_variant,intron_variant | |||||
VEP_impact | LOW | |||||||
HGVSc | K09G1.1b.2:c.187-9_187-5del | |||||||
Intron_number | 4/7 | |||||||
K09G1.1b.1 | VEP_consequence | splice_region_variant,intron_variant | ||||||
VEP_impact | LOW | |||||||
HGVSc | K09G1.1b.1:c.187-9_187-5del | |||||||
Intron_number | 3/6 | |||||||
K09G1.1b.3 | VEP_consequence | splice_region_variant,intron_variant | ||||||
VEP_impact | LOW | |||||||
HGVSc | K09G1.1b.3:c.187-9_187-5del | |||||||
Intron_number | 4/7 | |||||||
K09G1.1a.1 | VEP_consequence | splice_region_variant,intron_variant | ||||||
VEP_impact | LOW | |||||||
HGVSc | K09G1.1a.1:c.223-9_223-5del | |||||||
Intron_number | 3/6 | |||||||
K09G1.1e.1 | VEP_consequence | splice_region_variant,intron_variant | ||||||
VEP_impact | LOW | |||||||
HGVSc | K09G1.1e.1:c.328-9_328-5del | |||||||
Intron_number | 3/5 | |||||||
K09G1.1b.4 | VEP_consequence | splice_region_variant,intron_variant | ||||||
VEP_impact | LOW | |||||||
HGVSc | K09G1.1b.4:c.187-9_187-5del | |||||||
Intron_number | 4/7 | |||||||
K09G1.1d.1 | VEP_consequence | splice_region_variant,intron_variant | ||||||
VEP_impact | LOW | |||||||
HGVSc | K09G1.1d.1:c.310-9_310-5del | |||||||
Intron_number | 3/5 | |||||||
K09G1.1c.1 | VEP_consequence | splice_region_variant,intron_variant | ||||||
VEP_impact | LOW | |||||||
HGVSc | K09G1.1c.1:c.301-9_301-5del | |||||||
Intron_number | 3/5 | |||||||
Method | WGS_Flibotte |