WormBase Tree Display for Variation: WBVar02049684
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WBVar02049684 | Name | Public_name | WBVar02049684 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00778858 | |||||||
W04B5.3c.1:c.*225_*226del | ||||||||
W04B5.3a.1:c.1054-120_1054-119del | ||||||||
W04B5.3b.1:c.1054-120_1054-119del | ||||||||
HGVSg | CHROMOSOME_III:g.2422834_2422835del | |||||||
Sequence_details | SMap | S_parent | Sequence | W04B5 | ||||
Flanking_sequences | GACCAAAAGTGAGCGAAACCTAGCCAATAT | GGGTGTCATTTTGAAGGTCTCGACGCGATA | ||||||
Mapping_target | W04B5 | |||||||
Source_location | 225 | CHROMOSOME_III | 2422824 | 2422825 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Deletion | |||||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00022886 | From_analysis | Million_mutation_project_reanalysis | |||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00021020 | ||||||
Transcript | W04B5.3a.1 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | W04B5.3a.1:c.1054-120_1054-119del | |||||||
Intron_number | 10/13 | |||||||
W04B5.3c.1 | VEP_consequence | 3_prime_UTR_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | W04B5.3c.1:c.*225_*226del | |||||||
cDNA_position | 1402-1403 | |||||||
Exon_number | 11/13 | |||||||
W04B5.3b.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | W04B5.3b.1:c.1054-120_1054-119del | |||||||
Intron_number | 9/11 | |||||||
Method | WGS_Flibotte |