WormBase Tree Display for Variation: WBVar02048382
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WBVar02048382 | Name | Public_name | WBVar02048382 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00777546 | |||||||
M6.1d.1:c.-8del | ||||||||
M6.1f.1:c.-8del | ||||||||
M6.1a.1:c.1958-48del | ||||||||
M6.1e.1:c.2192-48del | ||||||||
M6.1b.1:c.1958-48del | ||||||||
M6.1a.2:c.1958-48del | ||||||||
HGVSg | CHROMOSOME_X:g.645680del | |||||||
Sequence_details | SMap | S_parent | Sequence | M6 | ||||
Flanking_sequences | GTATAGGCCGCGTAAGTCGACATTTTTTGG | TTTTTTTTGTCGATTTTAGAAGTTAATAAT | ||||||
Mapping_target | M6 | |||||||
Source_location | 225 | CHROMOSOME_X | 645679 | 645679 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Deletion | |||||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00022878 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00022930 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00002056 | ||||||
Transcript | M6.1f.1 | VEP_consequence | 5_prime_UTR_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | M6.1f.1:c.-8del | |||||||
cDNA_position | 29 | |||||||
Exon_number | 1/8 | |||||||
M6.1e.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | M6.1e.1:c.2192-48del | |||||||
Intron_number | 13/23 | |||||||
M6.1b.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | M6.1b.1:c.1958-48del | |||||||
Intron_number | 11/22 | |||||||
M6.1a.2 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | M6.1a.2:c.1958-48del | |||||||
Intron_number | 11/17 | |||||||
M6.1d.1 | VEP_consequence | 5_prime_UTR_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | M6.1d.1:c.-8del | |||||||
cDNA_position | 45 | |||||||
Exon_number | 1/13 | |||||||
M6.1a.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | M6.1a.1:c.1958-48del | |||||||
Intron_number | 14/20 | |||||||
Method | WGS_Flibotte |