WormBase Tree Display for Variation: WBVar02047519
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WBVar02047519 | Name | Public_name | WBVar02047519 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00776672 | |||||||
CE35670:p.Thr5ArgfsTer3 | ||||||||
Y51H4A.25b.1:c.8del | ||||||||
CE50116:p.Thr5ArgfsTer3 | ||||||||
Y51H4A.25d.1:c.8del | ||||||||
HGVSg | CHROMOSOME_IV:g.16736338del | |||||||
Sequence_details | SMap | S_parent | Sequence | Y51H4A | ||||
Flanking_sequences | TAAATTAAGTAAAAATTTTAGCGATGCTCC | AAAAACGGCCCTAATTATTGGGGCGTTATC | ||||||
Mapping_target | Y51H4A | |||||||
Source_location | 225 | CHROMOSOME_IV | 16736305 | 16736305 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Deletion | |||||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00022868 | From_analysis | Million_mutation_project_reanalysis | |||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00013119 | ||||||
Transcript | Y51H4A.25d.1 | VEP_consequence | frameshift_variant | |||||
VEP_impact | HIGH | |||||||
HGVSc | Y51H4A.25d.1:c.8del | |||||||
HGVSp | CE50116:p.Thr5ArgfsTer3 | |||||||
cDNA_position | 8 | |||||||
CDS_position | 8 | |||||||
Protein_position | 3 | |||||||
Exon_number | 1/1 | |||||||
Codon_change | cAa/ca | |||||||
Amino_acid_change | Q/X | |||||||
Y51H4A.25b.1 | VEP_consequence | frameshift_variant | ||||||
VEP_impact | HIGH | |||||||
HGVSc | Y51H4A.25b.1:c.8del | |||||||
HGVSp | CE35670:p.Thr5ArgfsTer3 | |||||||
cDNA_position | 10 | |||||||
CDS_position | 8 | |||||||
Protein_position | 3 | |||||||
Exon_number | 2/4 | |||||||
Codon_change | cAa/ca | |||||||
Amino_acid_change | Q/X | |||||||
Method | WGS_Flibotte |