WormBase Tree Display for Variation: WBVar02046568
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WBVar02046568 | Name | Public_name | WBVar02046568 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00775703 | |||||||
C47C12.6d.1:c.1106-182del | ||||||||
C47C12.6b.1:c.1327+104del | ||||||||
C47C12.6f.1:c.1076-182del | ||||||||
C47C12.6a.1:c.1130-182del | ||||||||
C47C12.6c.1:c.1160-182del | ||||||||
C47C12.6e.1:c.1297+104del | ||||||||
C47C12.6g.1:c.1070-182del | ||||||||
C47C12.6a.2:c.1130-182del | ||||||||
HGVSg | CHROMOSOME_X:g.7766358del | |||||||
Sequence_details | SMap | S_parent | Sequence | C47C12 | ||||
Flanking_sequences | AATCTTTTTGTTAACTGCATGGTTATGTTG | TTTTTTTTAATCTCACATGTTGAATAATTA | ||||||
Mapping_target | C47C12 | |||||||
Source_location | 225 | CHROMOSOME_X | 7766307 | 7766307 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Deletion | |||||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00022852 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00022856 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022878 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022930 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00000950 | ||||||
Transcript | C47C12.6e.1 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | C47C12.6e.1:c.1297+104del | |||||||
Intron_number | 9/16 | |||||||
C47C12.6c.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | C47C12.6c.1:c.1160-182del | |||||||
Intron_number | 9/16 | |||||||
C47C12.6a.2 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | C47C12.6a.2:c.1130-182del | |||||||
Intron_number | 8/16 | |||||||
C47C12.6b.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | C47C12.6b.1:c.1327+104del | |||||||
Intron_number | 10/17 | |||||||
C47C12.6a.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | C47C12.6a.1:c.1130-182del | |||||||
Intron_number | 9/17 | |||||||
C47C12.6d.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | C47C12.6d.1:c.1106-182del | |||||||
Intron_number | 8/15 | |||||||
C47C12.6f.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | C47C12.6f.1:c.1076-182del | |||||||
Intron_number | 7/14 | |||||||
C47C12.6g.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | C47C12.6g.1:c.1070-182del | |||||||
Intron_number | 11/18 | |||||||
Method | WGS_Flibotte |