WormBase Tree Display for Variation: WBVar02030554
expand all nodes | collapse all nodes | view schema
WBVar02030554 | Name | Public_name | WBVar02030554 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00759125 | |||||||
H14E04.2c.1:c.915-83del | ||||||||
H14E04.2d.1:c.528-83del | ||||||||
H14E04.2a.1:c.894-83del | ||||||||
H14E04.2b.1:c.903-83del | ||||||||
HGVSg | CHROMOSOME_III:g.2381555del | |||||||
Sequence_details | SMap | S_parent | Sequence | H14E04 | ||||
Flanking_sequences | GTGTATAAATGAATAGTCTTTAAAAATAAA | TTTTTTGATTTTCAAAAAAAAAAACAAAAA | ||||||
Mapping_target | H14E04 | |||||||
Source_location | 225 | CHROMOSOME_III | 2381545 | 2381545 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Deletion | |||||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00023191 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00023286 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00019199 | ||||||
Transcript | H14E04.2a.1 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | H14E04.2a.1:c.894-83del | |||||||
Intron_number | 7/11 | |||||||
H14E04.2c.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | H14E04.2c.1:c.915-83del | |||||||
Intron_number | 8/12 | |||||||
H14E04.2b.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | H14E04.2b.1:c.903-83del | |||||||
Intron_number | 7/11 | |||||||
H14E04.2d.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | H14E04.2d.1:c.528-83del | |||||||
Intron_number | 4/8 | |||||||
Method | WGS_Flibotte |