WormBase Tree Display for Variation: WBVar02028558
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| WBVar02028558 | Name | Public_name | WBVar02028558 | |||||
|---|---|---|---|---|---|---|---|---|
| Other_name | cewivar00757097 | |||||||
| Y43H11AL.1a.3:c.1084-252_1084-242del | ||||||||
| Y43H11AL.1b.1:c.1245-252_1245-242del | ||||||||
| Y43H11AL.1c.1:c.1203-252_1203-242del | ||||||||
| Y43H11AL.1a.4:c.1084-252_1084-242del | ||||||||
| Y43H11AL.1a.2:c.1084-252_1084-242del | ||||||||
| Y43H11AL.1d.1:c.270-252_270-242del | ||||||||
| Y43H11AL.1a.1:c.1084-252_1084-242del | ||||||||
| HGVSg | CHROMOSOME_II:g.224039_224049del | |||||||
| Sequence_details | SMap | S_parent | Sequence | Y43H11AL | ||||
| Flanking_sequences | AATAGCCAAGAAATAGATGGGCTTATCGTT | TTTTTTTAAAAATTTCATTTTTTTAAATTG | ||||||
| Mapping_target | Y43H11AL | |||||||
| Source_location | 225 | CHROMOSOME_II | 224039 | 224049 | From_analysis | Million_mutation_project_reanalysis | ||
| Type_of_mutation | Deletion | |||||||
| SeqStatus | Sequenced | |||||||
| Variation_type | Natural_variant | |||||||
| Origin | Species | Caenorhabditis elegans | ||||||
| Strain | WBStrain00022878 | From_analysis | Million_mutation_project_reanalysis | |||||
| WBStrain00023191 | From_analysis | Million_mutation_project_reanalysis | ||||||
| Laboratory | VC | |||||||
| Analysis | Million_mutation_project_reanalysis | |||||||
| Status | Live | |||||||
| Affects | Gene | WBGene00021545 | ||||||
| Transcript | Y43H11AL.1a.3 | VEP_consequence | intron_variant | |||||
| VEP_impact | MODIFIER | |||||||
| HGVSc | Y43H11AL.1a.3:c.1084-252_1084-242del | |||||||
| Intron_number | 7/10 | |||||||
| Y43H11AL.1c.1 | VEP_consequence | intron_variant | ||||||
| VEP_impact | MODIFIER | |||||||
| HGVSc | Y43H11AL.1c.1:c.1203-252_1203-242del | |||||||
| Intron_number | 6/8 | |||||||
| Y43H11AL.1d.1 | VEP_consequence | intron_variant | ||||||
| VEP_impact | MODIFIER | |||||||
| HGVSc | Y43H11AL.1d.1:c.270-252_270-242del | |||||||
| Intron_number | 2/4 | |||||||
| Y43H11AL.1b.1 | VEP_consequence | intron_variant | ||||||
| VEP_impact | MODIFIER | |||||||
| HGVSc | Y43H11AL.1b.1:c.1245-252_1245-242del | |||||||
| Intron_number | 8/11 | |||||||
| Y43H11AL.1a.1 | VEP_consequence | intron_variant | ||||||
| VEP_impact | MODIFIER | |||||||
| HGVSc | Y43H11AL.1a.1:c.1084-252_1084-242del | |||||||
| Intron_number | 7/10 | |||||||
| Y43H11AL.1a.2 | VEP_consequence | intron_variant | ||||||
| VEP_impact | MODIFIER | |||||||
| HGVSc | Y43H11AL.1a.2:c.1084-252_1084-242del | |||||||
| Intron_number | 7/8 | |||||||
| Y43H11AL.1a.4 | VEP_consequence | intron_variant | ||||||
| VEP_impact | MODIFIER | |||||||
| HGVSc | Y43H11AL.1a.4:c.1084-252_1084-242del | |||||||
| Intron_number | 7/9 | |||||||
| Method | WGS_Flibotte |
