WormBase Tree Display for Variation: WBVar02026021
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WBVar02026021 | Name | Public_name | WBVar02026021 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00754535 | |||||||
CE24516:p.Ser483del | ||||||||
Y60A3A.1.1:c.1448_1450del | ||||||||
HGVSg | CHROMOSOME_V:g.19999066_19999068del | |||||||
Sequence_details | SMap | S_parent | Sequence | Y60A3A | ||||
Flanking_sequences | CGCGATTCGCGTTGTTCGGCGATGGTTTTG | TGCTGCCACATACGACGAAGGTCGCTGGAA | ||||||
Mapping_target | Y60A3A | |||||||
Source_location | 225 | CHROMOSOME_V | 19999035 | 19999037 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Deletion | |||||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027662 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00006786 | ||||||
Transcript | Y60A3A.1.1 | VEP_consequence | inframe_deletion | |||||
VEP_impact | MODERATE | |||||||
HGVSc | Y60A3A.1.1:c.1448_1450del | |||||||
HGVSp | CE24516:p.Ser483del | |||||||
cDNA_position | 1513-1515 | |||||||
CDS_position | 1448-1450 | |||||||
Protein_position | 483-484 | |||||||
Exon_number | 7/11 | |||||||
Codon_change | aGCAca/aca | |||||||
Amino_acid_change | ST/T | |||||||
Method | WGS_Flibotte |