WormBase Tree Display for Variation: WBVar02023558
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WBVar02023558 | Name | Public_name | WBVar02023558 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00752068 | |||||||
F39G3.5a.1:c.447+272del | ||||||||
F39G3.5b.1:c.447+272del | ||||||||
F39G3.5b.2:c.447+272del | ||||||||
HGVSg | CHROMOSOME_V:g.4723385del | |||||||
Sequence_details | SMap | S_parent | Sequence | F39G3 | ||||
Flanking_sequences | ATTTGTCCAATTTTCAGAATTTTTTTTCAC | AAAAAAAACATTTTATTCCAATTTTAAAGT | ||||||
Mapping_target | F39G3 | |||||||
Source_location | 225 | CHROMOSOME_V | 4723371 | 4723371 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Deletion | |||||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00018210 | ||||||
Transcript | F39G3.5b.2 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | F39G3.5b.2:c.447+272del | |||||||
Intron_number | 3/4 | |||||||
F39G3.5a.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | F39G3.5a.1:c.447+272del | |||||||
Intron_number | 3/5 | |||||||
F39G3.5b.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | F39G3.5b.1:c.447+272del | |||||||
Intron_number | 2/4 | |||||||
Method | WGS_Flibotte |