WormBase Tree Display for Variation: WBVar02018112
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WBVar02018112 | Name | Public_name | WBVar02018112 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00746605 | |||||||
ZK1307.1b.1:c.598-5_598-4del | ||||||||
ZK1307.1a.1:c.616-5_616-4del | ||||||||
HGVSg | CHROMOSOME_II:g.9654659_9654660del | |||||||
Sequence_details | SMap | S_parent | Sequence | ZK1307 | ||||
Flanking_sequences | AATCGAGTTTGGAAGACGACGGAGGATCTG | CACAAAAAGTTTTTTAACTAGGGATTTCAA | ||||||
Mapping_target | ZK1307 | |||||||
Source_location | 225 | CHROMOSOME_II | 9654600 | 9654601 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Deletion | |||||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027662 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00014244 | ||||||
Transcript | ZK1307.1a.1 | VEP_consequence | splice_region_variant,intron_variant | |||||
VEP_impact | LOW | |||||||
HGVSc | ZK1307.1a.1:c.616-5_616-4del | |||||||
Intron_number | 5/6 | |||||||
ZK1307.1b.1 | VEP_consequence | splice_region_variant,intron_variant | ||||||
VEP_impact | LOW | |||||||
HGVSc | ZK1307.1b.1:c.598-5_598-4del | |||||||
Intron_number | 3/3 | |||||||
Method | WGS_Flibotte |