WormBase Tree Display for Variation: WBVar02016836
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WBVar02016836 | Name | Public_name | WBVar02016836 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00745315 | |||||||
Y71A12B.17a.1:c.2141_2145del | ||||||||
CE48003:p.Ser718AspfsTer9 | ||||||||
Y71A12B.17b.1:c.2150_2154del | ||||||||
CE47935:p.Ser715AspfsTer9 | ||||||||
HGVSg | CHROMOSOME_I:g.13987924_13987928del | |||||||
Sequence_details | SMap | S_parent | Sequence | Y71A12B | ||||
Flanking_sequences | GAGAATGTATGTCGCTTCTTAAAATTTTGC | ACGACTTTGGACAGCAAATTGGAATGTGAG | ||||||
Mapping_target | Y71A12B | |||||||
Source_location | 225 | CHROMOSOME_I | 13987912 | 13987916 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Deletion | |||||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00045058 | ||||||
Transcript | Y71A12B.17b.1 | VEP_consequence | frameshift_variant | |||||
VEP_impact | HIGH | |||||||
HGVSc | Y71A12B.17b.1:c.2150_2154del | |||||||
HGVSp | CE48003:p.Ser718AspfsTer9 | |||||||
cDNA_position | 3186-3190 | |||||||
CDS_position | 2150-2154 | |||||||
Protein_position | 717-718 | |||||||
Exon_number | 14/16 | |||||||
Codon_change | cACTCA/c | |||||||
Amino_acid_change | HS/X | |||||||
Y71A12B.17a.1 | VEP_consequence | frameshift_variant | ||||||
VEP_impact | HIGH | |||||||
HGVSc | Y71A12B.17a.1:c.2141_2145del | |||||||
HGVSp | CE47935:p.Ser715AspfsTer9 | |||||||
cDNA_position | 2187-2191 | |||||||
CDS_position | 2141-2145 | |||||||
Protein_position | 714-715 | |||||||
Exon_number | 13/15 | |||||||
Codon_change | cACTCA/c | |||||||
Amino_acid_change | HS/X | |||||||
Method | WGS_Flibotte |