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WormBase Tree Display for Variation: WBVar02016836

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Name Class

WBVar02016836NamePublic_nameWBVar02016836
Other_namecewivar00745315
Y71A12B.17a.1:c.2141_2145del
CE48003:p.Ser718AspfsTer9
Y71A12B.17b.1:c.2150_2154del
CE47935:p.Ser715AspfsTer9
HGVSgCHROMOSOME_I:g.13987924_13987928del
Sequence_detailsSMapS_parentSequenceY71A12B
Flanking_sequencesGAGAATGTATGTCGCTTCTTAAAATTTTGCACGACTTTGGACAGCAAATTGGAATGTGAG
Mapping_targetY71A12B
Source_location225CHROMOSOME_I1398791213987916From_analysisMillion_mutation_project_reanalysis
Type_of_mutationDeletion
SeqStatusSequenced
Variation_typeNatural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00023139From_analysisMillion_mutation_project_reanalysis
WBStrain00027648From_analysisMillion_mutation_project_reanalysis
WBStrain00027660From_analysisMillion_mutation_project_reanalysis
LaboratoryVC
AnalysisMillion_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00045058
TranscriptY71A12B.17b.1VEP_consequenceframeshift_variant
VEP_impactHIGH
HGVScY71A12B.17b.1:c.2150_2154del
HGVSpCE48003:p.Ser718AspfsTer9
cDNA_position3186-3190
CDS_position2150-2154
Protein_position717-718
Exon_number14/16
Codon_changecACTCA/c
Amino_acid_changeHS/X
Y71A12B.17a.1VEP_consequenceframeshift_variant
VEP_impactHIGH
HGVScY71A12B.17a.1:c.2141_2145del
HGVSpCE47935:p.Ser715AspfsTer9
cDNA_position2187-2191
CDS_position2141-2145
Protein_position714-715
Exon_number13/15
Codon_changecACTCA/c
Amino_acid_changeHS/X
MethodWGS_Flibotte