WormBase Tree Display for Variation: WBVar02014219
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WBVar02014219 | Name | Public_name | WBVar02014219 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00742674 | |||||||
Y43H11AL.1c.1:c.1339-65dup | ||||||||
Y43H11AL.1a.4:c.*204dup | ||||||||
Y43H11AL.1a.1:c.*116-65dup | ||||||||
Y43H11AL.1e.1:c.115-65dup | ||||||||
Y43H11AL.1a.3:c.*116-65dup | ||||||||
Y43H11AL.1b.1:c.1381-65dup | ||||||||
Y43H11AL.1d.1:c.406-65dup | ||||||||
HGVSg | CHROMOSOME_II:g.223275_223276insA | |||||||
Sequence_details | SMap | S_parent | Sequence | Y43H11AL | ||||
Flanking_sequences | GGAAAAATTCGATTTTAAATTTTTTTAAGG | AAAAAAAAAATACCTGGTTTTCAATTTAAC | ||||||
Mapping_target | Y43H11AL | |||||||
Source_location | 225 | CHROMOSOME_II | 223275 | 223276 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Insertion | A | ||||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00022850 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00023018 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00023138 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00021545 | ||||||
Transcript | Y43H11AL.1a.3 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y43H11AL.1a.3:c.*116-65dup | |||||||
Intron_number | 10/10 | |||||||
Y43H11AL.1e.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y43H11AL.1e.1:c.115-65dup | |||||||
Intron_number | 2/2 | |||||||
Y43H11AL.1c.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y43H11AL.1c.1:c.1339-65dup | |||||||
Intron_number | 8/8 | |||||||
Y43H11AL.1d.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y43H11AL.1d.1:c.406-65dup | |||||||
Intron_number | 4/4 | |||||||
Y43H11AL.1b.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y43H11AL.1b.1:c.1381-65dup | |||||||
Intron_number | 10/11 | |||||||
Y43H11AL.1a.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y43H11AL.1a.1:c.*116-65dup | |||||||
Intron_number | 10/10 | |||||||
Y43H11AL.1a.4 | VEP_consequence | 3_prime_UTR_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y43H11AL.1a.4:c.*204dup | |||||||
cDNA_position | 1331-1332 | |||||||
Exon_number | 10/10 | |||||||
Method | WGS_Flibotte |