WormBase Tree Display for Variation: WBVar02009552
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WBVar02009552 | Name | Public_name | WBVar02009552 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00737303 | |||||||
Y71G12B.11b.1:c.2151-988del | ||||||||
Y71G12B.11c.1:c.-66del | ||||||||
Y71G12B.11f.1:c.1056-988del | ||||||||
Y71G12B.11a.1:c.2151-988del | ||||||||
Y71G12B.11e.1:c.1056-988del | ||||||||
HGVSg | CHROMOSOME_I:g.1729829del | |||||||
Sequence_details | SMap | S_parent | Sequence | Y71G12B | ||||
Flanking_sequences | TATATATATCCTTCTGTTTTGCAATATCCT | CCCCCCCCCCTCCTCTATTCTAAATATTCT | ||||||
Mapping_target | Y71G12B | |||||||
Source_location | 225 | CHROMOSOME_I | 1729831 | 1729831 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Deletion | |||||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00006643 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00006645 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00008273 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022868 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00023191 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00023192 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00023665 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027652 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00006771 | ||||||
Transcript | Y71G12B.11f.1 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y71G12B.11f.1:c.1056-988del | |||||||
Intron_number | 2/3 | |||||||
Y71G12B.11c.1 | VEP_consequence | 5_prime_UTR_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y71G12B.11c.1:c.-66del | |||||||
cDNA_position | 3 | |||||||
Exon_number | 1/7 | |||||||
Y71G12B.11e.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y71G12B.11e.1:c.1056-988del | |||||||
Intron_number | 2/6 | |||||||
Y71G12B.11a.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y71G12B.11a.1:c.2151-988del | |||||||
Intron_number | 6/11 | |||||||
Y71G12B.11b.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y71G12B.11b.1:c.2151-988del | |||||||
Intron_number | 6/12 | |||||||
Method | WGS_Flibotte |