WormBase Tree Display for Variation: WBVar02006947
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WBVar02006947 | Name | Public_name | WBVar02006947 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00734567 | |||||||
CE33491:p.Pro47_Ser52delinsArg | ||||||||
ZK1127.12.1:c.140_154del | ||||||||
ZK1127.12.2:c.140_154del | ||||||||
HGVSg | CHROMOSOME_II:g.7052566_7052580del | |||||||
Sequence_details | SMap | S_parent | Sequence | ZK1127 | ||||
Flanking_sequences | TTCTTCAGGTCGAGGAGATGCATTCAAAAC | GTGTCCGATCTACGGTAACAGATCGTGATG | ||||||
Mapping_target | ZK1127 | |||||||
Source_location | 225 | CHROMOSOME_II | 7052524 | 7052538 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Deletion | |||||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00006640 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00022902 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00022857 | ||||||
Transcript | ZK1127.12.1 | VEP_consequence | inframe_deletion | |||||
VEP_impact | MODERATE | |||||||
HGVSc | ZK1127.12.1:c.140_154del | |||||||
HGVSp | CE33491:p.Pro47_Ser52delinsArg | |||||||
cDNA_position | 222-236 | |||||||
CDS_position | 140-154 | |||||||
Protein_position | 47-52 | |||||||
Exon_number | 4/5 | |||||||
Codon_change | cCGATCTACGGTAACAgt/cgt | |||||||
Amino_acid_change | PIYGNS/R | |||||||
ZK1127.12.2 | VEP_consequence | inframe_deletion | ||||||
VEP_impact | MODERATE | |||||||
HGVSc | ZK1127.12.2:c.140_154del | |||||||
HGVSp | CE33491:p.Pro47_Ser52delinsArg | |||||||
cDNA_position | 147-161 | |||||||
CDS_position | 140-154 | |||||||
Protein_position | 47-52 | |||||||
Exon_number | 3/4 | |||||||
Codon_change | cCGATCTACGGTAACAgt/cgt | |||||||
Amino_acid_change | PIYGNS/R | |||||||
Method | WGS_Flibotte |