WormBase Tree Display for Variation: WBVar02001577
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WBVar02001577 | Name | Public_name | WBVar02001577 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00729053 | |||||||
Y39G10AR.2c.1:c.359+143del | ||||||||
Y39G10AR.2a.1:c.1322+143del | ||||||||
Y39G10AR.2d.1:c.353+143del | ||||||||
Y39G10AR.2b.1:c.1316+143del | ||||||||
HGVSg | CHROMOSOME_I:g.2408219del | |||||||
Sequence_details | SMap | S_parent | Sequence | Y39G10AR | ||||
Flanking_sequences | TTTATCTTGCTTTGTTTTCCGATTTTTCCC | TTTTTTTTCTTATTAAAACTGATAAAGAAA | ||||||
Mapping_target | Y39G10AR | |||||||
Source_location | 225 | CHROMOSOME_I | 2408221 | 2408221 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Deletion | |||||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00006637 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00022868 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00023191 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00023192 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027662 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00021460 | ||||||
Transcript | Y39G10AR.2a.1 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y39G10AR.2a.1:c.1322+143del | |||||||
Intron_number | 7/8 | |||||||
Y39G10AR.2b.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y39G10AR.2b.1:c.1316+143del | |||||||
Intron_number | 7/8 | |||||||
Y39G10AR.2d.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y39G10AR.2d.1:c.353+143del | |||||||
Intron_number | 2/2 | |||||||
Y39G10AR.2c.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y39G10AR.2c.1:c.359+143del | |||||||
Intron_number | 2/2 | |||||||
Method | WGS_Flibotte |