WormBase Tree Display for Variation: WBVar01997761
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WBVar01997761 | Name | Public_name | WBVar01997761 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00725099 | |||||||
T19H12.9.1:c.1252_1260del | ||||||||
CE13768:p.Ala418_Ala420del | ||||||||
HGVSg | CHROMOSOME_V:g.4887640_4887648del | |||||||
Sequence_details | SMap | S_parent | Sequence | T19H12 | ||||
Flanking_sequences | TTCTCCATTTTTCAAATCAAACTTGTCGTA | TCCTCCATGCCTTGCCAACATAACGGCATT | ||||||
Mapping_target | T19H12 | |||||||
Source_location | 225 | CHROMOSOME_V | 4887626 | 4887634 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Deletion | |||||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00006629 | From_analysis | Million_mutation_project_reanalysis | |||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00020592 | ||||||
Transcript | T19H12.9.1 | VEP_consequence | inframe_deletion | |||||
VEP_impact | MODERATE | |||||||
HGVSc | T19H12.9.1:c.1252_1260del | |||||||
HGVSp | CE13768:p.Ala418_Ala420del | |||||||
cDNA_position | 1286-1294 | |||||||
CDS_position | 1252-1260 | |||||||
Protein_position | 418-420 | |||||||
Exon_number | 5/7 | |||||||
Codon_change | GCTGTGGCA/- | |||||||
Amino_acid_change | AVA/- | |||||||
Method | WGS_Flibotte |