WormBase Tree Display for Variation: WBVar01992421
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WBVar01992421 | Name | Public_name | WBVar01992421 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00719169 | |||||||
CE53598:p.Asn50IlefsTer138 | ||||||||
Y73B3A.11.1:c.139del | ||||||||
HGVSg | CHROMOSOME_X:g.148496del | |||||||
Sequence_details | SMap | S_parent | Sequence | Y73B3A | ||||
Flanking_sequences | ACGGCTGCCCAAAAAAGAAAAAATTTAGCG | AAAAAAAAAATCAATTTTCGCTCCAAGAAA | ||||||
Mapping_target | Y73B3A | |||||||
Source_location | 225 | CHROMOSOME_X | 148496 | 148496 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Deletion | |||||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00006625 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00022886 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027662 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00022213 | ||||||
Transcript | Y73B3A.11.1 | VEP_consequence | frameshift_variant | |||||
VEP_impact | HIGH | |||||||
HGVSc | Y73B3A.11.1:c.139del | |||||||
HGVSp | CE53598:p.Asn50IlefsTer138 | |||||||
cDNA_position | 319 | |||||||
CDS_position | 139 | |||||||
Protein_position | 47 | |||||||
Exon_number | 3/7 | |||||||
Codon_change | Aaa/aa | |||||||
Amino_acid_change | K/X | |||||||
Method | WGS_Flibotte |