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WormBase Tree Display for Variation: WBVar01990108

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Name Class

WBVar01990108NamePublic_nameWBVar01990108
Other_namecewivar00716838
T04C9.3.1:c.100_115del
CE04878:p.Arg44SerfsTer5
HGVSgCHROMOSOME_III:g.5985739_5985754del
Sequence_detailsSMapS_parentSequenceT04C9
Flanking_sequencesTTTGGGTTGATGGAATGTGATGGAATGAGAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGTCTGAGCA
Mapping_targetT04C9
Source_location225CHROMOSOME_III59856895985704From_analysisMillion_mutation_project_reanalysis
Type_of_mutationDeletion
SeqStatusSequenced
Variation_typeNatural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00006625From_analysisMillion_mutation_project_reanalysis
LaboratoryVC
AnalysisMillion_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00020211
TranscriptT04C9.3.1VEP_consequenceframeshift_variant
VEP_impactHIGH
HGVScT04C9.3.1:c.100_115del
HGVSpCE04878:p.Arg44SerfsTer5
cDNA_position100-115
CDS_position100-115
Protein_position34-39
Exon_number1/1
Codon_changeAGAGAGAGAGAGAGAGag/ag
Amino_acid_changeRERERE/X
MethodWGS_Flibotte