WormBase Tree Display for Variation: WBVar01975612
expand all nodes | collapse all nodes | view schema
WBVar01975612 | Name | Public_name | WBVar01975612 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00701613 | |||||||
C01G10.11f.1:c.*52_*54del | ||||||||
C01G10.11b.1:c.*975_*977del | ||||||||
C01G10.11a.1:c.*52_*54del | ||||||||
HGVSg | CHROMOSOME_V:g.15079764_15079766del | |||||||
Sequence_details | SMap | S_parent | Sequence | C01G10 | ||||
Flanking_sequences | CCATACTAGTCATTTTCCCCCATCTACTTG | TTCTTCTTCTTTCTATTCTACAATTTAAAA | ||||||
Mapping_target | C01G10 | |||||||
Source_location | 225 | CHROMOSOME_V | 15079747 | 15079749 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Deletion | |||||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | |||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00006808 | ||||||
WBGene00305285 | ||||||||
Transcript | C01G10.11f.1 | VEP_consequence | 3_prime_UTR_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | C01G10.11f.1:c.*52_*54del | |||||||
cDNA_position | 1343-1345 | |||||||
Exon_number | 12/12 | |||||||
C01G10.11b.1 | VEP_consequence | 3_prime_UTR_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | C01G10.11b.1:c.*975_*977del | |||||||
cDNA_position | 2096-2098 | |||||||
Exon_number | 10/10 | |||||||
C01G10.11a.1 | VEP_consequence | 3_prime_UTR_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | C01G10.11a.1:c.*52_*54del | |||||||
cDNA_position | 1197-1199 | |||||||
Exon_number | 11/11 | |||||||
C25D7.19 | ||||||||
Method | WGS_Flibotte |