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WormBase Tree Display for Variation: WBVar01972506

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Name Class

WBVar01972506NamePublic_nameWBVar01972506
Other_namecewivar00698483
T27C4.4d.1:c.1978_1983del
CE51633:p.Ala526_Ala527del
CE33331:p.Ala661_Ala662del
T27C4.4e.1:c.1573_1578del
CE21212:p.Ala661_Ala662del
CE21211:p.Ala661_Ala662del
T27C4.4b.2:c.1978_1983del
T27C4.4b.1:c.1978_1983del
T27C4.4a.1:c.1978_1983del
HGVSgCHROMOSOME_V:g.3707117_3707122del
Sequence_detailsSMapS_parentSequenceT27C4
Flanking_sequencesGCCTCAAATGGAACTCCAGCTTCTCAGAAGGCCACGGCGGCGGTGAACACGTTGACTCCA
Mapping_targetT27C4
Source_location225CHROMOSOME_V37071043707109From_analysisMillion_mutation_project_reanalysis
Type_of_mutationDeletion
SeqStatusSequenced
Variation_typeNatural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisMillion_mutation_project_reanalysis
LaboratoryVC
AnalysisMillion_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00003025
TranscriptT27C4.4d.1VEP_consequenceinframe_deletion
VEP_impactMODERATE
HGVScT27C4.4d.1:c.1978_1983del
HGVSpCE33331:p.Ala661_Ala662del
cDNA_position2002-2007
CDS_position1978-1983
Protein_position660-661
Exon_number4/9
Codon_changeGCGGCT/-
Amino_acid_changeAA/-
T27C4.4b.2VEP_consequenceinframe_deletion
VEP_impactMODERATE
HGVScT27C4.4b.2:c.1978_1983del
HGVSpCE21212:p.Ala661_Ala662del
cDNA_position2002-2007
CDS_position1978-1983
Protein_position660-661
Exon_number4/9
Codon_changeGCGGCT/-
Amino_acid_changeAA/-
T27C4.4a.1VEP_consequenceinframe_deletion
VEP_impactMODERATE
HGVScT27C4.4a.1:c.1978_1983del
HGVSpCE21211:p.Ala661_Ala662del
cDNA_position1995-2000
CDS_position1978-1983
Protein_position660-661
Exon_number4/10
Codon_changeGCGGCT/-
Amino_acid_changeAA/-
T27C4.4e.1VEP_consequenceinframe_deletion
VEP_impactMODERATE
HGVScT27C4.4e.1:c.1573_1578del
HGVSpCE51633:p.Ala526_Ala527del
cDNA_position1573-1578
CDS_position1573-1578
Protein_position525-526
Exon_number1/5
Codon_changeGCGGCT/-
Amino_acid_changeAA/-
T27C4.4b.1VEP_consequenceinframe_deletion
VEP_impactMODERATE
HGVScT27C4.4b.1:c.1978_1983del
HGVSpCE21212:p.Ala661_Ala662del
cDNA_position1995-2000
CDS_position1978-1983
Protein_position660-661
Exon_number4/9
Codon_changeGCGGCT/-
Amino_acid_changeAA/-
MethodWGS_Flibotte