WormBase Tree Display for Variation: WBVar01966920
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WBVar01966920 | Name | Public_name | WBVar01966920 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00692880 | |||||||
C02F4.1.1:c.4972_4977del | ||||||||
CE24779:p.Thr1659_Met1660del | ||||||||
HGVSg | CHROMOSOME_IV:g.10492202_10492207del | |||||||
Sequence_details | SMap | S_parent | Sequence | C02F4 | ||||
Flanking_sequences | TTTGATTCGGATTCGATCAATGATGGAATG | ATGAAGTCAGGAAAAGCTGCAGTACTTGGA | ||||||
Mapping_target | C02F4 | |||||||
Source_location | 225 | CHROMOSOME_IV | 10492182 | 10492187 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Deletion | |||||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | |||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00000419 | ||||||
Transcript | C02F4.1.1 | VEP_consequence | inframe_deletion | |||||
VEP_impact | MODERATE | |||||||
HGVSc | C02F4.1.1:c.4972_4977del | |||||||
HGVSp | CE24779:p.Thr1659_Met1660del | |||||||
cDNA_position | 4987-4992 | |||||||
CDS_position | 4972-4977 | |||||||
Protein_position | 1658-1659 | |||||||
Exon_number | 19/21 | |||||||
Codon_change | ATGACA/- | |||||||
Amino_acid_change | MT/- | |||||||
Method | WGS_Flibotte |