WormBase Tree Display for Variation: WBVar01962127
expand all nodes | collapse all nodes | view schema
WBVar01962127 | Name | Public_name | WBVar01962127 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00687937 | |||||||
H14E04.2c.1:c.506-13_506-12del | ||||||||
H14E04.2a.1:c.485-13_485-12del | ||||||||
H14E04.2d.1:c.119-13_119-12del | ||||||||
H14E04.2b.1:c.494-13_494-12del | ||||||||
HGVSg | CHROMOSOME_III:g.2379585_2379586del | |||||||
Sequence_details | SMap | S_parent | Sequence | H14E04 | ||||
Flanking_sequences | TAAAAACTAAAAAAATACCCCAAATTTTCC | TTTTTTTCCAGATTCCGGCTCAGAATTGGA | ||||||
Mapping_target | H14E04 | |||||||
Source_location | 225 | CHROMOSOME_III | 2379575 | 2379576 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Deletion | |||||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00006629 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00006637 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00024204 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00019199 | ||||||
Transcript | H14E04.2a.1 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | H14E04.2a.1:c.485-13_485-12del | |||||||
Intron_number | 5/11 | |||||||
H14E04.2c.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | H14E04.2c.1:c.506-13_506-12del | |||||||
Intron_number | 6/12 | |||||||
H14E04.2b.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | H14E04.2b.1:c.494-13_494-12del | |||||||
Intron_number | 5/11 | |||||||
H14E04.2d.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | H14E04.2d.1:c.119-13_119-12del | |||||||
Intron_number | 2/8 | |||||||
Method | WGS_Flibotte |