WormBase Tree Display for Variation: WBVar01945942
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WBVar01945942 | Name | Public_name | WBVar01945942 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00667467 | |||||||
T06H11.1g.1:c.*77_*81del | ||||||||
T06H11.1e.1:c.*77_*81del | ||||||||
T06H11.1a.1:c.*77_*81del | ||||||||
T06H11.1c.1:c.*77_*81del | ||||||||
HGVSg | CHROMOSOME_X:g.10105018_10105022del | |||||||
Sequence_details | SMap | S_parent | Sequence | T06H11 | ||||
Flanking_sequences | ATGCAGATACAATTCCAAATATCCTAGAAA | TTGTTGAACAGAAAGAAAATGGAAAAGATA | ||||||
Mapping_target | T06H11 | |||||||
Source_location | 225 | CHROMOSOME_X | 10104959 | 10104963 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Deletion | |||||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00004599 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00006792 | ||||||
Transcript | T06H11.1g.1 | VEP_consequence | 3_prime_UTR_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | T06H11.1g.1:c.*77_*81del | |||||||
cDNA_position | 1755-1759 | |||||||
Exon_number | 13/13 | |||||||
T06H11.1e.1 | VEP_consequence | 3_prime_UTR_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | T06H11.1e.1:c.*77_*81del | |||||||
cDNA_position | 1665-1669 | |||||||
Exon_number | 14/14 | |||||||
T06H11.1a.1 | VEP_consequence | 3_prime_UTR_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | T06H11.1a.1:c.*77_*81del | |||||||
cDNA_position | 1853-1857 | |||||||
Exon_number | 12/12 | |||||||
T06H11.1c.1 | VEP_consequence | 3_prime_UTR_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | T06H11.1c.1:c.*77_*81del | |||||||
cDNA_position | 1754-1758 | |||||||
Exon_number | 14/14 | |||||||
Method | WGS_Flibotte |