WormBase Tree Display for Variation: WBVar01945603
expand all nodes | collapse all nodes | view schema
WBVar01945603 | Name | Public_name | WBVar01945603 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00667127 | |||||||
C25B8.1a.1:c.324-22del | ||||||||
C25B8.4c.1:c.8+542del | ||||||||
C25B8.4a.1:c.8+542del | ||||||||
C25B8.1b.1:c.468-22del | ||||||||
HGVSg | CHROMOSOME_X:g.6622290del | |||||||
Sequence_details | SMap | S_parent | Sequence | C25B8 | ||||
Flanking_sequences | TGAGCTTACGGAGAAAAATAATACAATTAA | TTAAAAAAAAACATTTTTCAGATTATTCAT | ||||||
Mapping_target | C25B8 | |||||||
Source_location | 225 | CHROMOSOME_X | 6622253 | 6622253 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Deletion | |||||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00004599 | From_analysis | Million_mutation_project_reanalysis | |||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00016088 | ||||||
WBGene00002233 | ||||||||
Transcript | C25B8.1a.1 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | C25B8.1a.1:c.324-22del | |||||||
Intron_number | 5/17 | |||||||
C25B8.1b.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | C25B8.1b.1:c.468-22del | |||||||
Intron_number | 6/18 | |||||||
C25B8.4c.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | C25B8.4c.1:c.8+542del | |||||||
Intron_number | 2/6 | |||||||
C25B8.4a.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | C25B8.4a.1:c.8+542del | |||||||
Intron_number | 2/7 | |||||||
Method | WGS_Flibotte |