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WormBase Tree Display for Variation: WBVar01944617

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Name Class

WBVar01944617NamePublic_nameWBVar01944617
Other_namecewivar00666102
Y55D5A.5c.1:c.2376-772_2376-738del
Y55D5A.5a.1:c.2376-772_2376-738del
Y55D5A.5e.1:c.2148-772_2148-738del
Y55D5A.5d.1:c.2235-772_2235-738del
HGVSgCHROMOSOME_III:g.3011261_3011295del
Sequence_detailsSMapS_parentSequenceY55D5A
Flanking_sequencesTCTAAATTTCCGGCAAATCGGTAATTTGCTGAAAATCAAAATTTCCGGCAAATCGGCAAATTGCCGGAATTGAAATTTCCGGCAAATCGGTAATTTGCTGAAAATCAAAATTTCCGGCAAATCGGTAATTTGCTGAAAATCAAAATTTCCGGCAAATCGG
Mapping_targetY55D5A
Source_location225CHROMOSOME_III30112533011287From_analysisMillion_mutation_project_reanalysis
Type_of_mutationDeletion
SeqStatusSequenced
Variation_typeNatural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004599From_analysisMillion_mutation_project_reanalysis
WBStrain00006629From_analysisMillion_mutation_project_reanalysis
WBStrain00023072From_analysisMillion_mutation_project_reanalysis
WBStrain00023139From_analysisMillion_mutation_project_reanalysis
WBStrain00027648From_analysisMillion_mutation_project_reanalysis
WBStrain00027660From_analysisMillion_mutation_project_reanalysis
LaboratoryVC
AnalysisMillion_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00000898
TranscriptY55D5A.5e.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY55D5A.5e.1:c.2148-772_2148-738del
Intron_number7/14
Y55D5A.5a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY55D5A.5a.1:c.2376-772_2376-738del
Intron_number10/18
Y55D5A.5c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY55D5A.5c.1:c.2376-772_2376-738del
Intron_number11/20
Y55D5A.5d.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY55D5A.5d.1:c.2235-772_2235-738del
Intron_number8/15
MethodWGS_Flibotte