WormBase Tree Display for Variation: WBVar01943604
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WBVar01943604 | Name | Public_name | WBVar01943604 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00664874 | |||||||
C05D12.3c.3:c.2252del | ||||||||
C05D12.3c.1:c.2252del | ||||||||
CE36974:p.Gln751HisfsTer22 | ||||||||
C05D12.3c.2:c.2252del | ||||||||
C05D12.3a.1:c.2252del | ||||||||
CE39469:p.Gln751HisfsTer22 | ||||||||
HGVSg | CHROMOSOME_II:g.11428955del | |||||||
Sequence_details | SMap | S_parent | Sequence | C05D12 | ||||
Flanking_sequences | TTGAAAAGAACTCTGCAGCTACAGTATTCC | ATTTATTGGAACTGGAATCAAGGATATTTC | ||||||
Mapping_target | C05D12 | |||||||
Source_location | 225 | CHROMOSOME_II | 11428891 | 11428891 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Deletion | |||||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00004599 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00004600 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00006629 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00006631 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00006640 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022878 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00023138 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027647 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00014666 | ||||||
Transcript | C05D12.3a.1 | VEP_consequence | frameshift_variant | |||||
VEP_impact | HIGH | |||||||
HGVSc | C05D12.3a.1:c.2252del | |||||||
HGVSp | CE36974:p.Gln751HisfsTer22 | |||||||
cDNA_position | 2264 | |||||||
CDS_position | 2252 | |||||||
Protein_position | 751 | |||||||
Exon_number | 11/16 | |||||||
Codon_change | cAa/ca | |||||||
Amino_acid_change | Q/X | |||||||
C05D12.3c.1 | VEP_consequence | frameshift_variant | ||||||
VEP_impact | HIGH | |||||||
HGVSc | C05D12.3c.1:c.2252del | |||||||
HGVSp | CE39469:p.Gln751HisfsTer22 | |||||||
cDNA_position | 2267 | |||||||
CDS_position | 2252 | |||||||
Protein_position | 751 | |||||||
Exon_number | 11/18 | |||||||
Codon_change | cAa/ca | |||||||
Amino_acid_change | Q/X | |||||||
C05D12.3c.3 | VEP_consequence | frameshift_variant | ||||||
VEP_impact | HIGH | |||||||
HGVSc | C05D12.3c.3:c.2252del | |||||||
HGVSp | CE39469:p.Gln751HisfsTer22 | |||||||
cDNA_position | 2252 | |||||||
CDS_position | 2252 | |||||||
Protein_position | 751 | |||||||
Exon_number | 10/18 | |||||||
Codon_change | cAa/ca | |||||||
Amino_acid_change | Q/X | |||||||
C05D12.3c.2 | VEP_consequence | frameshift_variant | ||||||
VEP_impact | HIGH | |||||||
HGVSc | C05D12.3c.2:c.2252del | |||||||
HGVSp | CE39469:p.Gln751HisfsTer22 | |||||||
cDNA_position | 2266 | |||||||
CDS_position | 2252 | |||||||
Protein_position | 751 | |||||||
Exon_number | 11/17 | |||||||
Codon_change | cAa/ca | |||||||
Amino_acid_change | Q/X | |||||||
Method | WGS_Flibotte |