WormBase Tree Display for Variation: WBVar01928591
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WBVar01928591 | Name | Public_name | WBVar01928591 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00647333 | |||||||
Y16B4A.2.1:c.3171del | ||||||||
CE48023:p.Gly1058GlufsTer17 | ||||||||
HGVSg | CHROMOSOME_X:g.14766735del | |||||||
Sequence_details | SMap | S_parent | Sequence | C05G5 | ||||
Flanking_sequences | GGATCCGTGTTCATCAGCTGCGATGGTTCC | GGTTCTGCTACCTCCACTACATCCTTCTTA | ||||||
Mapping_target | C05G5 | |||||||
Source_location | 225 | CHROMOSOME_X | 14766666 | 14766666 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Deletion | |||||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain (35) | ||||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00012445 | ||||||
Transcript | Y16B4A.2.1 | VEP_consequence | frameshift_variant | |||||
VEP_impact | HIGH | |||||||
HGVSc | Y16B4A.2.1:c.3171del | |||||||
HGVSp | CE48023:p.Gly1058GlufsTer17 | |||||||
cDNA_position | 3198 | |||||||
CDS_position | 3171 | |||||||
Protein_position | 1057 | |||||||
Exon_number | 19/37 | |||||||
Codon_change | ccC/cc | |||||||
Amino_acid_change | P/X | |||||||
Method | WGS_Flibotte |