WormBase Tree Display for Variation: WBVar01926993
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WBVar01926993 | Name | Public_name | WBVar01926993 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00645632 | |||||||
C25B8.4a.1:c.9-857del | ||||||||
C25B8.1b.1:c.168+324del | ||||||||
C25B8.4b.1:c.-741del | ||||||||
C25B8.4c.1:c.9-857del | ||||||||
HGVSg | CHROMOSOME_X:g.6619570del | |||||||
Sequence_details | SMap | S_parent | Sequence | C25B8 | ||||
Flanking_sequences | ACAGAGCACATTATGTTCTTCAGTCTTTTG | TTTTTCAAAACAAGTTTGTAAGAAAAAAGT | ||||||
Mapping_target | C25B8 | |||||||
Source_location | 225 | CHROMOSOME_X | 6619533 | 6619533 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Deletion | |||||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain (26) | ||||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00016088 | ||||||
WBGene00002233 | ||||||||
Transcript | C25B8.1b.1 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | C25B8.1b.1:c.168+324del | |||||||
Intron_number | 3/18 | |||||||
C25B8.4b.1 | VEP_consequence | 5_prime_UTR_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | C25B8.4b.1:c.-741del | |||||||
cDNA_position | 1237 | |||||||
Exon_number | 1/7 | |||||||
C25B8.4c.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | C25B8.4c.1:c.9-857del | |||||||
Intron_number | 2/6 | |||||||
C25B8.4a.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | C25B8.4a.1:c.9-857del | |||||||
Intron_number | 2/7 | |||||||
Method | WGS_Flibotte |