WormBase Tree Display for Variation: WBVar01924478
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WBVar01924478 | Name | Public_name | WBVar01924478 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00642978 | |||||||
Y50D4C.1a.1:c.1149-470del | ||||||||
Y50D4C.1e.1:c.726-470del | ||||||||
Y50D4C.1f.1:c.372-470del | ||||||||
Y50D4C.1g.1:c.234-470del | ||||||||
Y50D4C.1d.1:c.1119-470del | ||||||||
HGVSg | CHROMOSOME_V:g.993735del | |||||||
Sequence_details | SMap | S_parent | Sequence | Y50D4C | ||||
Flanking_sequences | TTTATAAGAGAAGTGTGGAATTTTTTCTAG | AAAAAAAAACGAAAATTTGCAAAAATTAAA | ||||||
Mapping_target | Y50D4C | |||||||
Source_location | 225 | CHROMOSOME_V | 993736 | 993736 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Deletion | |||||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00000032 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00006622 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00006625 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022850 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022852 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022856 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022930 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00006770 | ||||||
Transcript | Y50D4C.1g.1 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y50D4C.1g.1:c.234-470del | |||||||
Intron_number | 1/2 | |||||||
Y50D4C.1d.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y50D4C.1d.1:c.1119-470del | |||||||
Intron_number | 4/5 | |||||||
Y50D4C.1e.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y50D4C.1e.1:c.726-470del | |||||||
Intron_number | 3/4 | |||||||
Y50D4C.1a.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y50D4C.1a.1:c.1149-470del | |||||||
Intron_number | 5/7 | |||||||
Y50D4C.1f.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y50D4C.1f.1:c.372-470del | |||||||
Intron_number | 2/3 | |||||||
Method | WGS_Flibotte |