WormBase Tree Display for Variation: WBVar01890582
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WBVar01890582 | Name | Public_name | WBVar01890582 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00605698 | |||||||
W05H12.4.1:c.-130G>A | ||||||||
W05H12.4.2:c.-75G>A | ||||||||
HGVSg | CHROMOSOME_I:g.13411770G>A | |||||||
Sequence_details | SMap | S_parent | Sequence | C01A2 | ||||
Flanking_sequences | GAAAAAAAATGCATTTGCTGGTTCAGCCAA | GAGTAAGTCGTATTAGTTCTGAAAAATTAA | ||||||
Mapping_target | C01A2 | |||||||
Source_location | 225 | CHROMOSOME_I | 13411759 | 13411759 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | G | A | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00023665 | From_analysis | Million_mutation_project_reanalysis | |||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00219206 | ||||||
Transcript | W05H12.4.2 | VEP_consequence | splice_region_variant,5_prime_UTR_variant | |||||
VEP_impact | LOW | |||||||
HGVSc | W05H12.4.2:c.-75G>A | |||||||
cDNA_position | 107 | |||||||
Exon_number | 1/5 | |||||||
W05H12.4.1 | VEP_consequence | 5_prime_UTR_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | W05H12.4.1:c.-130G>A | |||||||
cDNA_position | 111 | |||||||
Exon_number | 1/4 | |||||||
Method | WGS_Flibotte |