WormBase Tree Display for Variation: WBVar01888702
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WBVar01888702 | Name | Public_name | WBVar01888702 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00603703 | |||||||
F41E7.7b.1:c.50+275A>G | ||||||||
CE53287:p.His436= | ||||||||
F41E7.6.1:c.1308T>C | ||||||||
HGVSg | CHROMOSOME_X:g.10308197A>G | |||||||
Sequence_details | SMap | S_parent | Sequence | F41E7 | ||||
Flanking_sequences | TGTTAAACTTCGGACTGTTTCCGTTCTTCC | TGATAAAACATTCGCGTAGAAGCAGTTTCG | ||||||
Mapping_target | F41E7 | |||||||
Source_location | 225 | CHROMOSOME_X | 10308137 | 10308137 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | A | G | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | |||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00009623 | ||||||
WBGene00009622 | ||||||||
Transcript | F41E7.6.1 | VEP_consequence | synonymous_variant | |||||
VEP_impact | LOW | |||||||
HGVSc | F41E7.6.1:c.1308T>C | |||||||
HGVSp | CE53287:p.His436= | |||||||
cDNA_position | 1308 | |||||||
CDS_position | 1308 | |||||||
Protein_position | 436 | |||||||
Exon_number | 11/16 | |||||||
Codon_change | caT/caC | |||||||
Amino_acid_change | H | |||||||
F41E7.7b.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | F41E7.7b.1:c.50+275A>G | |||||||
Intron_number | 2/5 | |||||||
Method | WGS_Flibotte |