WormBase Tree Display for Variation: WBVar01878062
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WBVar01878062 | Name | Public_name | WBVar01878062 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00592505 | |||||||
F11D5.3b.1:c.315+688A>C | ||||||||
F11D5.24:n.145A>C | ||||||||
F11D5.20:n.136T>G | ||||||||
F11D5.3a.1:c.405+688A>C | ||||||||
F11D5.3b.2:c.315+688A>C | ||||||||
HGVSg | CHROMOSOME_X:g.3320146A>C | |||||||
Sequence_details | SMap | S_parent | Sequence | F11D5 | ||||
Flanking_sequences | CGAATTAAGTATTGTCGTAAAATGCGGTAC | GTGAATTGAAGAGGGGGGCACTGAGTGACA | ||||||
Mapping_target | F11D5 | |||||||
Source_location | 225 | CHROMOSOME_X | 3320134 | 3320134 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | A | C | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | |||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00200180 | ||||||
WBGene00199195 | ||||||||
WBGene00017381 | ||||||||
Transcript | F11D5.3b.2 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | F11D5.3b.2:c.315+688A>C | |||||||
Intron_number | 5/14 | |||||||
F11D5.24 | VEP_consequence | non_coding_transcript_exon_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | F11D5.24:n.145A>C | |||||||
cDNA_position | 145 | |||||||
Exon_number | 1/1 | |||||||
F11D5.3b.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | F11D5.3b.1:c.315+688A>C | |||||||
Intron_number | 4/14 | |||||||
F11D5.3a.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | F11D5.3a.1:c.405+688A>C | |||||||
Intron_number | 5/15 | |||||||
F11D5.20 | VEP_consequence | non_coding_transcript_exon_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | F11D5.20:n.136T>G | |||||||
cDNA_position | 136 | |||||||
Exon_number | 1/1 | |||||||
Method | WGS_Flibotte |