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WormBase Tree Display for Variation: WBVar01878062

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Name Class

WBVar01878062NamePublic_nameWBVar01878062
Other_namecewivar00592505
F11D5.3b.1:c.315+688A>C
F11D5.24:n.145A>C
F11D5.20:n.136T>G
F11D5.3a.1:c.405+688A>C
F11D5.3b.2:c.315+688A>C
HGVSgCHROMOSOME_X:g.3320146A>C
Sequence_detailsSMapS_parentSequenceF11D5
Flanking_sequencesCGAATTAAGTATTGTCGTAAAATGCGGTACGTGAATTGAAGAGGGGGGCACTGAGTGACA
Mapping_targetF11D5
Source_location225CHROMOSOME_X33201343320134From_analysisMillion_mutation_project_reanalysis
Type_of_mutationSubstitutionAC
SeqStatusSequenced
Variation_typeNatural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00023072From_analysisMillion_mutation_project_reanalysis
LaboratoryVC
AnalysisMillion_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00200180
WBGene00199195
WBGene00017381
TranscriptF11D5.3b.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF11D5.3b.2:c.315+688A>C
Intron_number5/14
F11D5.24VEP_consequencenon_coding_transcript_exon_variant
VEP_impactMODIFIER
HGVScF11D5.24:n.145A>C
cDNA_position145
Exon_number1/1
F11D5.3b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF11D5.3b.1:c.315+688A>C
Intron_number4/14
F11D5.3a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF11D5.3a.1:c.405+688A>C
Intron_number5/15
F11D5.20VEP_consequencenon_coding_transcript_exon_variant
VEP_impactMODIFIER
HGVScF11D5.20:n.136T>G
cDNA_position136
Exon_number1/1
MethodWGS_Flibotte