WormBase Tree Display for Variation: WBVar01861701
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WBVar01861701 | Name | Public_name | WBVar01861701 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00575305 | |||||||
CE53031:p.Asn21Asp | ||||||||
CE53048:p.Glu14= | ||||||||
T19H12.6a.1:c.42A>G | ||||||||
T19H12.6b.1:c.61A>G | ||||||||
HGVSg | CHROMOSOME_V:g.4877613T>C | |||||||
Sequence_details | SMap | S_parent | Sequence | T19H12 | ||||
Flanking_sequences | CTCGTTTCGCCTTTCTGTTGTTTCCCGGGT | TCTGAGCGTTGGCAAAGGTGACGGTGGATA | ||||||
Mapping_target | T19H12 | |||||||
Source_location | 225 | CHROMOSOME_V | 4877599 | 4877599 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | T | C | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | |||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00020590 | ||||||
Transcript | T19H12.6b.1 (12) | |||||||
T19H12.6a.1 | VEP_consequence | synonymous_variant | ||||||
VEP_impact | LOW | |||||||
HGVSc | T19H12.6a.1:c.42A>G | |||||||
HGVSp | CE53048:p.Glu14= | |||||||
cDNA_position | 73 | |||||||
CDS_position | 42 | |||||||
Protein_position | 14 | |||||||
Exon_number | 2/9 | |||||||
Codon_change | gaA/gaG | |||||||
Amino_acid_change | E | |||||||
Method | WGS_Flibotte |