Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for Variation: WBVar01855496

expand all nodes | collapse all nodes | view schema

Name Class

WBVar01855496NamePublic_nameWBVar01855496
Other_namecewivar00568752
CE32045:p.Ala80=
F23B2.5b.1:c.240A>C
CE09585:p.Ala80=
F23B2.4.1:c.56+707T>G
F23B2.5c.1:c.240A>C
F23B2.5a.1:c.240A>C
CE32046:p.Ala80=
HGVSgCHROMOSOME_IV:g.9145434A>C
Sequence_detailsSMapS_parentSequenceF23B2
Flanking_sequencesGCCAAACTTTATGAGATATGGGCGATCAGCGGTAAGTCTAACCTTTTTCTGATAAAAAAG
Mapping_targetF23B2
Source_location225CHROMOSOME_IV91454209145420From_analysisMillion_mutation_project_reanalysis
Type_of_mutationSubstitutionAC
SeqStatusSequenced
Variation_typeNatural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00023072From_analysisMillion_mutation_project_reanalysis
LaboratoryVC
AnalysisMillion_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00000906
WBGene00001444
TranscriptF23B2.5b.1VEP_consequencesplice_region_variant,synonymous_variant
VEP_impactLOW
HGVScF23B2.5b.1:c.240A>C
HGVSpCE32045:p.Ala80=
cDNA_position240
CDS_position240
Protein_position80
Exon_number3/7
Codon_changegcA/gcC
Amino_acid_changeA
F23B2.4.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF23B2.4.1:c.56+707T>G
Intron_number2/20
F23B2.5c.1VEP_consequencesplice_region_variant,synonymous_variant
VEP_impactLOW
HGVScF23B2.5c.1:c.240A>C
HGVSpCE32046:p.Ala80=
cDNA_position240
CDS_position240
Protein_position80
Exon_number3/7
Codon_changegcA/gcC
Amino_acid_changeA
F23B2.5a.1VEP_consequencesplice_region_variant,synonymous_variant
VEP_impactLOW
HGVScF23B2.5a.1:c.240A>C
HGVSpCE09585:p.Ala80=
cDNA_position248
CDS_position240
Protein_position80
Exon_number4/8
Codon_changegcA/gcC
Amino_acid_changeA
MethodWGS_Flibotte