WormBase Tree Display for Variation: WBVar01855496
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WBVar01855496 | Name | Public_name | WBVar01855496 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00568752 | |||||||
CE32045:p.Ala80= | ||||||||
F23B2.5b.1:c.240A>C | ||||||||
CE09585:p.Ala80= | ||||||||
F23B2.4.1:c.56+707T>G | ||||||||
F23B2.5c.1:c.240A>C | ||||||||
F23B2.5a.1:c.240A>C | ||||||||
CE32046:p.Ala80= | ||||||||
HGVSg | CHROMOSOME_IV:g.9145434A>C | |||||||
Sequence_details | SMap | S_parent | Sequence | F23B2 | ||||
Flanking_sequences | GCCAAACTTTATGAGATATGGGCGATCAGC | GGTAAGTCTAACCTTTTTCTGATAAAAAAG | ||||||
Mapping_target | F23B2 | |||||||
Source_location | 225 | CHROMOSOME_IV | 9145420 | 9145420 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | A | C | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | |||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00000906 | ||||||
WBGene00001444 | ||||||||
Transcript | F23B2.5b.1 | VEP_consequence | splice_region_variant,synonymous_variant | |||||
VEP_impact | LOW | |||||||
HGVSc | F23B2.5b.1:c.240A>C | |||||||
HGVSp | CE32045:p.Ala80= | |||||||
cDNA_position | 240 | |||||||
CDS_position | 240 | |||||||
Protein_position | 80 | |||||||
Exon_number | 3/7 | |||||||
Codon_change | gcA/gcC | |||||||
Amino_acid_change | A | |||||||
F23B2.4.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | F23B2.4.1:c.56+707T>G | |||||||
Intron_number | 2/20 | |||||||
F23B2.5c.1 | VEP_consequence | splice_region_variant,synonymous_variant | ||||||
VEP_impact | LOW | |||||||
HGVSc | F23B2.5c.1:c.240A>C | |||||||
HGVSp | CE32046:p.Ala80= | |||||||
cDNA_position | 240 | |||||||
CDS_position | 240 | |||||||
Protein_position | 80 | |||||||
Exon_number | 3/7 | |||||||
Codon_change | gcA/gcC | |||||||
Amino_acid_change | A | |||||||
F23B2.5a.1 | VEP_consequence | splice_region_variant,synonymous_variant | ||||||
VEP_impact | LOW | |||||||
HGVSc | F23B2.5a.1:c.240A>C | |||||||
HGVSp | CE09585:p.Ala80= | |||||||
cDNA_position | 248 | |||||||
CDS_position | 240 | |||||||
Protein_position | 80 | |||||||
Exon_number | 4/8 | |||||||
Codon_change | gcA/gcC | |||||||
Amino_acid_change | A | |||||||
Method | WGS_Flibotte |