WormBase Tree Display for Variation: WBVar01831769
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WBVar01831769 | Name | Public_name | WBVar01831769 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00543972 | |||||||
Y54G2A.49b.1:c.336+166G>A | ||||||||
Y54G2A.49a.1:c.192+166G>A | ||||||||
Y54G2A.6a.1:c.-152+1219C>T | ||||||||
HGVSg | CHROMOSOME_IV:g.2852508C>T | |||||||
Sequence_details | SMap | S_parent | Sequence | Y54G2A | ||||
Flanking_sequences | CGATTTGCCTGAATTCTTCAATTCCGGCAA | TCGCCAATTTGCTTGAATTTTTCAATTCAA | ||||||
Mapping_target | Y54G2A | |||||||
Source_location | 225 | CHROMOSOME_IV | 2852506 | 2852506 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | C | T | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00022887 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00022930 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00021872 | ||||||
WBGene00044492 | ||||||||
Transcript | Y54G2A.49b.1 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y54G2A.49b.1:c.336+166G>A | |||||||
Intron_number | 3/4 | |||||||
Y54G2A.49a.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y54G2A.49a.1:c.192+166G>A | |||||||
Intron_number | 1/2 | |||||||
Y54G2A.6a.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y54G2A.6a.1:c.-152+1219C>T | |||||||
Intron_number | 1/6 | |||||||
Method | WGS_Flibotte |