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WormBase Tree Display for Variation: WBVar01831769

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Name Class

WBVar01831769NamePublic_nameWBVar01831769
Other_namecewivar00543972
Y54G2A.49b.1:c.336+166G>A
Y54G2A.49a.1:c.192+166G>A
Y54G2A.6a.1:c.-152+1219C>T
HGVSgCHROMOSOME_IV:g.2852508C>T
Sequence_detailsSMapS_parentSequenceY54G2A
Flanking_sequencesCGATTTGCCTGAATTCTTCAATTCCGGCAATCGCCAATTTGCTTGAATTTTTCAATTCAA
Mapping_targetY54G2A
Source_location225CHROMOSOME_IV28525062852506From_analysisMillion_mutation_project_reanalysis
Type_of_mutationSubstitutionCT
SeqStatusSequenced
Variation_typeNatural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00022887From_analysisMillion_mutation_project_reanalysis
WBStrain00022930From_analysisMillion_mutation_project_reanalysis
LaboratoryVC
AnalysisMillion_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00021872
WBGene00044492
TranscriptY54G2A.49b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY54G2A.49b.1:c.336+166G>A
Intron_number3/4
Y54G2A.49a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY54G2A.49a.1:c.192+166G>A
Intron_number1/2
Y54G2A.6a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY54G2A.6a.1:c.-152+1219C>T
Intron_number1/6
MethodWGS_Flibotte